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Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations

Human γD-crystallin (HGDC) is an abundant lens protein residing in the nucleus of the human lens. Aggregation of this and other structural proteins within the lens leads to the development of cataract. Much has been explored on the stability and aggregation of HGDC and where detailed investigation a...

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Autores principales: Hsueh, Shu-Shun, Wang, S.-S. (Steven), Chen, Shu-Han, Wang, Chia-Lin, Wu, W. (Josephine), Lin, Ta-Hsien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8836049/
https://www.ncbi.nlm.nih.gov/pubmed/35163513
http://dx.doi.org/10.3390/ijms23031591
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author Hsueh, Shu-Shun
Wang, S.-S. (Steven)
Chen, Shu-Han
Wang, Chia-Lin
Wu, W. (Josephine)
Lin, Ta-Hsien
author_facet Hsueh, Shu-Shun
Wang, S.-S. (Steven)
Chen, Shu-Han
Wang, Chia-Lin
Wu, W. (Josephine)
Lin, Ta-Hsien
author_sort Hsueh, Shu-Shun
collection PubMed
description Human γD-crystallin (HGDC) is an abundant lens protein residing in the nucleus of the human lens. Aggregation of this and other structural proteins within the lens leads to the development of cataract. Much has been explored on the stability and aggregation of HGDC and where detailed investigation at the atomic resolution was needed, the X-ray structure was used as an initial starting conformer for molecular modeling. In this study, we implemented NMR-solution HGDC structures as starting conformers for molecular dynamics simulations to provide the missing pieces of the puzzle on the very early stages of HGDC unfolding leading up to the domain swap theories proposed by past studies. The high-resolution details of the conformational dynamics also revealed additional insights to possible early intervention for cataractogenesis.
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spelling pubmed-88360492022-02-12 Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations Hsueh, Shu-Shun Wang, S.-S. (Steven) Chen, Shu-Han Wang, Chia-Lin Wu, W. (Josephine) Lin, Ta-Hsien Int J Mol Sci Article Human γD-crystallin (HGDC) is an abundant lens protein residing in the nucleus of the human lens. Aggregation of this and other structural proteins within the lens leads to the development of cataract. Much has been explored on the stability and aggregation of HGDC and where detailed investigation at the atomic resolution was needed, the X-ray structure was used as an initial starting conformer for molecular modeling. In this study, we implemented NMR-solution HGDC structures as starting conformers for molecular dynamics simulations to provide the missing pieces of the puzzle on the very early stages of HGDC unfolding leading up to the domain swap theories proposed by past studies. The high-resolution details of the conformational dynamics also revealed additional insights to possible early intervention for cataractogenesis. MDPI 2022-01-29 /pmc/articles/PMC8836049/ /pubmed/35163513 http://dx.doi.org/10.3390/ijms23031591 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hsueh, Shu-Shun
Wang, S.-S. (Steven)
Chen, Shu-Han
Wang, Chia-Lin
Wu, W. (Josephine)
Lin, Ta-Hsien
Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations
title Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations
title_full Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations
title_fullStr Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations
title_full_unstemmed Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations
title_short Insights to Human γD-Crystallin Unfolding by NMR Spectroscopy and Molecular Dynamics Simulations
title_sort insights to human γd-crystallin unfolding by nmr spectroscopy and molecular dynamics simulations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8836049/
https://www.ncbi.nlm.nih.gov/pubmed/35163513
http://dx.doi.org/10.3390/ijms23031591
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