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Multiscale and integrative single-cell Hi-C analysis with Higashi

Single-cell Hi-C (scHi-C) can identify cell-to-cell variability of three-dimensional (3D) chromatin organization, but the sparseness of measured interactions poses an analysis challenge. Here we report Higashi, an algorithm based on hypergraph representation learning that can incorporate the latent...

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Detalles Bibliográficos
Autores principales: Zhang, Ruochi, Zhou, Tianming, Ma, Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8843812/
https://www.ncbi.nlm.nih.gov/pubmed/34635838
http://dx.doi.org/10.1038/s41587-021-01034-y