Using AnnoTree to Get More Assignments, Faster, in DIAMOND+MEGAN Microbiome Analysis

In microbiome analysis, one main approach is to align metagenomic sequencing reads against a protein reference database, such as NCBI-nr, and then to perform taxonomic and functional binning based on the alignments. This approach is embodied, for example, in the standard DIAMOND+MEGAN analysis pipel...

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Detalles Bibliográficos
Autores principales: Gautam, Anupam, Felderhoff, Hendrik, Bağci, Caner, Huson, Daniel H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8862659/
https://www.ncbi.nlm.nih.gov/pubmed/35191776
http://dx.doi.org/10.1128/msystems.01408-21

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8862659/
https://www.ncbi.nlm.nih.gov/pubmed/35191776
http://dx.doi.org/10.1128/msystems.01408-21

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