Cargando…

In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins

Many studies of the reconstitution of the Escherichia coli small ribosomal subunit from its individual molecular parts have been reported, but contrastingly, similar studies of the large ribosomal subunit have not been well performed to date. Here, we describe protocols for preparing the 33 ribosoma...

Descripción completa

Detalles Bibliográficos
Autores principales: Aoyama, Ryo, Masuda, Keiko, Shimojo, Masaru, Kanamori, Takashi, Ueda, Takuya, Shimizu, Yoshihiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8863084/
https://www.ncbi.nlm.nih.gov/pubmed/34750629
http://dx.doi.org/10.1093/jb/mvab121
_version_ 1784655166032576512
author Aoyama, Ryo
Masuda, Keiko
Shimojo, Masaru
Kanamori, Takashi
Ueda, Takuya
Shimizu, Yoshihiro
author_facet Aoyama, Ryo
Masuda, Keiko
Shimojo, Masaru
Kanamori, Takashi
Ueda, Takuya
Shimizu, Yoshihiro
author_sort Aoyama, Ryo
collection PubMed
description Many studies of the reconstitution of the Escherichia coli small ribosomal subunit from its individual molecular parts have been reported, but contrastingly, similar studies of the large ribosomal subunit have not been well performed to date. Here, we describe protocols for preparing the 33 ribosomal proteins of the E. coli 50S subunit and demonstrate successful reconstitution of a functionally active 50S particle that can perform protein synthesis in vitro. We also successfully reconstituted both ribosomal subunits (30S and 50S) and 70S ribosomes using a full set of recombinant ribosomal proteins by integrating our developed method with the previously developed fully recombinant-based integrated synthesis, assembly and translation. The approach described here makes a major contribution to the field of ribosome engineering and could be fundamental to the future studies of ribosome assembly processes.
format Online
Article
Text
id pubmed-8863084
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-88630842022-02-23 In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins Aoyama, Ryo Masuda, Keiko Shimojo, Masaru Kanamori, Takashi Ueda, Takuya Shimizu, Yoshihiro J Biochem Regular Paper Many studies of the reconstitution of the Escherichia coli small ribosomal subunit from its individual molecular parts have been reported, but contrastingly, similar studies of the large ribosomal subunit have not been well performed to date. Here, we describe protocols for preparing the 33 ribosomal proteins of the E. coli 50S subunit and demonstrate successful reconstitution of a functionally active 50S particle that can perform protein synthesis in vitro. We also successfully reconstituted both ribosomal subunits (30S and 50S) and 70S ribosomes using a full set of recombinant ribosomal proteins by integrating our developed method with the previously developed fully recombinant-based integrated synthesis, assembly and translation. The approach described here makes a major contribution to the field of ribosome engineering and could be fundamental to the future studies of ribosome assembly processes. Oxford University Press 2021-11-08 /pmc/articles/PMC8863084/ /pubmed/34750629 http://dx.doi.org/10.1093/jb/mvab121 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Regular Paper
Aoyama, Ryo
Masuda, Keiko
Shimojo, Masaru
Kanamori, Takashi
Ueda, Takuya
Shimizu, Yoshihiro
In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
title In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
title_full In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
title_fullStr In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
title_full_unstemmed In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
title_short In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
title_sort in vitro reconstitution of the escherichia coli 70s ribosome with a full set of recombinant ribosomal proteins
topic Regular Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8863084/
https://www.ncbi.nlm.nih.gov/pubmed/34750629
http://dx.doi.org/10.1093/jb/mvab121
work_keys_str_mv AT aoyamaryo invitroreconstitutionoftheescherichiacoli70sribosomewithafullsetofrecombinantribosomalproteins
AT masudakeiko invitroreconstitutionoftheescherichiacoli70sribosomewithafullsetofrecombinantribosomalproteins
AT shimojomasaru invitroreconstitutionoftheescherichiacoli70sribosomewithafullsetofrecombinantribosomalproteins
AT kanamoritakashi invitroreconstitutionoftheescherichiacoli70sribosomewithafullsetofrecombinantribosomalproteins
AT uedatakuya invitroreconstitutionoftheescherichiacoli70sribosomewithafullsetofrecombinantribosomalproteins
AT shimizuyoshihiro invitroreconstitutionoftheescherichiacoli70sribosomewithafullsetofrecombinantribosomalproteins