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Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major
The profiles of bacterial communities and volatile organic compounds (VOCs) of farmed red seabream (Pagrus major) from two batches during ice storage were studied using 16S metabarcoding (culture independent approach) and headspace Solid Phase Micro-Extraction—Gas Chromatography/Mass Spectrometry (S...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8909714/ https://www.ncbi.nlm.nih.gov/pubmed/35267299 http://dx.doi.org/10.3390/foods11050666 |
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author | Anagnostopoulos, Dimitrios A. Parlapani, Foteini F. Mallouchos, Athanasios Angelidou, Aikaterini Syropoulou, Faidra Minos, George Boziaris, Ioannis S. |
author_facet | Anagnostopoulos, Dimitrios A. Parlapani, Foteini F. Mallouchos, Athanasios Angelidou, Aikaterini Syropoulou, Faidra Minos, George Boziaris, Ioannis S. |
author_sort | Anagnostopoulos, Dimitrios A. |
collection | PubMed |
description | The profiles of bacterial communities and volatile organic compounds (VOCs) of farmed red seabream (Pagrus major) from two batches during ice storage were studied using 16S metabarcoding (culture independent approach) and headspace Solid Phase Micro-Extraction—Gas Chromatography/Mass Spectrometry (SPME-GC/MS) analysis, respectively. Sensory attributes and microbiological parameters were also evaluated. At Day 12 (shelf-life for both batches based on sensory evaluation), using classical microbiological analysis, Total Viable Counts (TVC) were found at the levels of 7–8 log cfu/g, and Pseudomonas and/or H(2)S producing bacteria dominated. On the other hand, the culture independent 16S metabarcoding analysis showed that Psychrobacter were the most abundant bacteria in fish tissue from batch 1, while Pseudomonas and Psychrobacter (at lower abundance) were the most abundant in fish from batch 2. Differences were also observed in VOC profiles between the two batches. However, combining the VOC results of the two batches, 15 compounds were found to present a similar trend during fish storage. Of them, 2-methylbutanal, 3-methylbutanal, 3-methyl-1-butanol, ethanol, 2,4 octadiene (2 isomers), ethyl lactate, acetaldehyde and (E)-2-penten-1-ol could be used as potential spoilage markers of red seabream because they increased during storage, mainly due to Psychrobacter and/or Pseudomonas activity and/or chemical activity (e.g., oxidation). Additionally, VOCs such as propanoic acid, nonanoic acid, decanoic acid, 1-propanol, 3,4-hexanediol and hexane decreased gradually with time, so they could be proposed as freshness markers of red seabream. Such information will be used to develop intelligent approaches for the rapid evaluation of spoilage course in red seabream during ice storage. |
format | Online Article Text |
id | pubmed-8909714 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-89097142022-03-11 Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major Anagnostopoulos, Dimitrios A. Parlapani, Foteini F. Mallouchos, Athanasios Angelidou, Aikaterini Syropoulou, Faidra Minos, George Boziaris, Ioannis S. Foods Article The profiles of bacterial communities and volatile organic compounds (VOCs) of farmed red seabream (Pagrus major) from two batches during ice storage were studied using 16S metabarcoding (culture independent approach) and headspace Solid Phase Micro-Extraction—Gas Chromatography/Mass Spectrometry (SPME-GC/MS) analysis, respectively. Sensory attributes and microbiological parameters were also evaluated. At Day 12 (shelf-life for both batches based on sensory evaluation), using classical microbiological analysis, Total Viable Counts (TVC) were found at the levels of 7–8 log cfu/g, and Pseudomonas and/or H(2)S producing bacteria dominated. On the other hand, the culture independent 16S metabarcoding analysis showed that Psychrobacter were the most abundant bacteria in fish tissue from batch 1, while Pseudomonas and Psychrobacter (at lower abundance) were the most abundant in fish from batch 2. Differences were also observed in VOC profiles between the two batches. However, combining the VOC results of the two batches, 15 compounds were found to present a similar trend during fish storage. Of them, 2-methylbutanal, 3-methylbutanal, 3-methyl-1-butanol, ethanol, 2,4 octadiene (2 isomers), ethyl lactate, acetaldehyde and (E)-2-penten-1-ol could be used as potential spoilage markers of red seabream because they increased during storage, mainly due to Psychrobacter and/or Pseudomonas activity and/or chemical activity (e.g., oxidation). Additionally, VOCs such as propanoic acid, nonanoic acid, decanoic acid, 1-propanol, 3,4-hexanediol and hexane decreased gradually with time, so they could be proposed as freshness markers of red seabream. Such information will be used to develop intelligent approaches for the rapid evaluation of spoilage course in red seabream during ice storage. MDPI 2022-02-24 /pmc/articles/PMC8909714/ /pubmed/35267299 http://dx.doi.org/10.3390/foods11050666 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Anagnostopoulos, Dimitrios A. Parlapani, Foteini F. Mallouchos, Athanasios Angelidou, Aikaterini Syropoulou, Faidra Minos, George Boziaris, Ioannis S. Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major |
title | Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major |
title_full | Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major |
title_fullStr | Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major |
title_full_unstemmed | Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major |
title_short | Volatile Organic Compounds and 16S Metabarcoding in Ice-Stored Red Seabream Pagrus major |
title_sort | volatile organic compounds and 16s metabarcoding in ice-stored red seabream pagrus major |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8909714/ https://www.ncbi.nlm.nih.gov/pubmed/35267299 http://dx.doi.org/10.3390/foods11050666 |
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