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Homologous Recombination Deficiency: Concepts, Definitions, and Assays
BACKGROUND: Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(a...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8914493/ https://www.ncbi.nlm.nih.gov/pubmed/35274707 http://dx.doi.org/10.1093/oncolo/oyab053 |
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author | Stewart, Mark D Merino Vega, Diana Arend, Rebecca C Baden, Jonathan F Barbash, Olena Beaubier, Nike Collins, Grace French, Tim Ghahramani, Negar Hinson, Patsy Jelinic, Petar Marton, Matthew J McGregor, Kimberly Parsons, Jerod Ramamurthy, Lakshman Sausen, Mark Sokol, Ethan S Stenzinger, Albrecht Stires, Hillary Timms, Kirsten M Turco, Diana Wang, Iris Williams, J Andrew Wong-Ho, Elaine Allen, Jeff |
author_facet | Stewart, Mark D Merino Vega, Diana Arend, Rebecca C Baden, Jonathan F Barbash, Olena Beaubier, Nike Collins, Grace French, Tim Ghahramani, Negar Hinson, Patsy Jelinic, Petar Marton, Matthew J McGregor, Kimberly Parsons, Jerod Ramamurthy, Lakshman Sausen, Mark Sokol, Ethan S Stenzinger, Albrecht Stires, Hillary Timms, Kirsten M Turco, Diana Wang, Iris Williams, J Andrew Wong-Ho, Elaine Allen, Jeff |
author_sort | Stewart, Mark D |
collection | PubMed |
description | BACKGROUND: Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(adenosine diphosphate [ADP]-ribose) polymerase (PARP) inhibitors and platinum-based chemotherapy, which target the destruction of cancer cells by working in concert with HRD through synthetic lethality. However, to identify patients with these tumors, it is vital to understand how to best measure homologous repair (HR) status and to characterize the level of alignment in these measurements across different diagnostic platforms. A key current challenge is that there is no standardized method to define, measure, and report HR status using diagnostics in the clinical setting. METHODS: Friends of Cancer Research convened a consortium of project partners from key healthcare sectors to address concerns about the lack of consistency in the way HRD is defined and methods for measuring HR status. RESULTS: This publication provides findings from the group’s discussions that identified opportunities to align the definition of HRD and the parameters that contribute to the determination of HR status. The consortium proposed recommendations and best practices to benefit the broader cancer community. CONCLUSION: Overall, this publication provides additional perspectives for scientist, physician, laboratory, and patient communities to contextualize the definition of HRD and various platforms that are used to measure HRD in tumors. |
format | Online Article Text |
id | pubmed-8914493 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-89144932022-03-11 Homologous Recombination Deficiency: Concepts, Definitions, and Assays Stewart, Mark D Merino Vega, Diana Arend, Rebecca C Baden, Jonathan F Barbash, Olena Beaubier, Nike Collins, Grace French, Tim Ghahramani, Negar Hinson, Patsy Jelinic, Petar Marton, Matthew J McGregor, Kimberly Parsons, Jerod Ramamurthy, Lakshman Sausen, Mark Sokol, Ethan S Stenzinger, Albrecht Stires, Hillary Timms, Kirsten M Turco, Diana Wang, Iris Williams, J Andrew Wong-Ho, Elaine Allen, Jeff Oncologist Cancer Diagnostics and Molecular Pathology BACKGROUND: Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(adenosine diphosphate [ADP]-ribose) polymerase (PARP) inhibitors and platinum-based chemotherapy, which target the destruction of cancer cells by working in concert with HRD through synthetic lethality. However, to identify patients with these tumors, it is vital to understand how to best measure homologous repair (HR) status and to characterize the level of alignment in these measurements across different diagnostic platforms. A key current challenge is that there is no standardized method to define, measure, and report HR status using diagnostics in the clinical setting. METHODS: Friends of Cancer Research convened a consortium of project partners from key healthcare sectors to address concerns about the lack of consistency in the way HRD is defined and methods for measuring HR status. RESULTS: This publication provides findings from the group’s discussions that identified opportunities to align the definition of HRD and the parameters that contribute to the determination of HR status. The consortium proposed recommendations and best practices to benefit the broader cancer community. CONCLUSION: Overall, this publication provides additional perspectives for scientist, physician, laboratory, and patient communities to contextualize the definition of HRD and various platforms that are used to measure HRD in tumors. Oxford University Press 2022-01-27 /pmc/articles/PMC8914493/ /pubmed/35274707 http://dx.doi.org/10.1093/oncolo/oyab053 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com. |
spellingShingle | Cancer Diagnostics and Molecular Pathology Stewart, Mark D Merino Vega, Diana Arend, Rebecca C Baden, Jonathan F Barbash, Olena Beaubier, Nike Collins, Grace French, Tim Ghahramani, Negar Hinson, Patsy Jelinic, Petar Marton, Matthew J McGregor, Kimberly Parsons, Jerod Ramamurthy, Lakshman Sausen, Mark Sokol, Ethan S Stenzinger, Albrecht Stires, Hillary Timms, Kirsten M Turco, Diana Wang, Iris Williams, J Andrew Wong-Ho, Elaine Allen, Jeff Homologous Recombination Deficiency: Concepts, Definitions, and Assays |
title | Homologous Recombination Deficiency: Concepts, Definitions, and Assays |
title_full | Homologous Recombination Deficiency: Concepts, Definitions, and Assays |
title_fullStr | Homologous Recombination Deficiency: Concepts, Definitions, and Assays |
title_full_unstemmed | Homologous Recombination Deficiency: Concepts, Definitions, and Assays |
title_short | Homologous Recombination Deficiency: Concepts, Definitions, and Assays |
title_sort | homologous recombination deficiency: concepts, definitions, and assays |
topic | Cancer Diagnostics and Molecular Pathology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8914493/ https://www.ncbi.nlm.nih.gov/pubmed/35274707 http://dx.doi.org/10.1093/oncolo/oyab053 |
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