Cargando…

Homologous Recombination Deficiency: Concepts, Definitions, and Assays

BACKGROUND: Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(a...

Descripción completa

Detalles Bibliográficos
Autores principales: Stewart, Mark D, Merino Vega, Diana, Arend, Rebecca C, Baden, Jonathan F, Barbash, Olena, Beaubier, Nike, Collins, Grace, French, Tim, Ghahramani, Negar, Hinson, Patsy, Jelinic, Petar, Marton, Matthew J, McGregor, Kimberly, Parsons, Jerod, Ramamurthy, Lakshman, Sausen, Mark, Sokol, Ethan S, Stenzinger, Albrecht, Stires, Hillary, Timms, Kirsten M, Turco, Diana, Wang, Iris, Williams, J Andrew, Wong-Ho, Elaine, Allen, Jeff
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8914493/
https://www.ncbi.nlm.nih.gov/pubmed/35274707
http://dx.doi.org/10.1093/oncolo/oyab053
_version_ 1784667720842739712
author Stewart, Mark D
Merino Vega, Diana
Arend, Rebecca C
Baden, Jonathan F
Barbash, Olena
Beaubier, Nike
Collins, Grace
French, Tim
Ghahramani, Negar
Hinson, Patsy
Jelinic, Petar
Marton, Matthew J
McGregor, Kimberly
Parsons, Jerod
Ramamurthy, Lakshman
Sausen, Mark
Sokol, Ethan S
Stenzinger, Albrecht
Stires, Hillary
Timms, Kirsten M
Turco, Diana
Wang, Iris
Williams, J Andrew
Wong-Ho, Elaine
Allen, Jeff
author_facet Stewart, Mark D
Merino Vega, Diana
Arend, Rebecca C
Baden, Jonathan F
Barbash, Olena
Beaubier, Nike
Collins, Grace
French, Tim
Ghahramani, Negar
Hinson, Patsy
Jelinic, Petar
Marton, Matthew J
McGregor, Kimberly
Parsons, Jerod
Ramamurthy, Lakshman
Sausen, Mark
Sokol, Ethan S
Stenzinger, Albrecht
Stires, Hillary
Timms, Kirsten M
Turco, Diana
Wang, Iris
Williams, J Andrew
Wong-Ho, Elaine
Allen, Jeff
author_sort Stewart, Mark D
collection PubMed
description BACKGROUND: Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(adenosine diphosphate [ADP]-ribose) polymerase (PARP) inhibitors and platinum-based chemotherapy, which target the destruction of cancer cells by working in concert with HRD through synthetic lethality. However, to identify patients with these tumors, it is vital to understand how to best measure homologous repair (HR) status and to characterize the level of alignment in these measurements across different diagnostic platforms. A key current challenge is that there is no standardized method to define, measure, and report HR status using diagnostics in the clinical setting. METHODS: Friends of Cancer Research convened a consortium of project partners from key healthcare sectors to address concerns about the lack of consistency in the way HRD is defined and methods for measuring HR status. RESULTS: This publication provides findings from the group’s discussions that identified opportunities to align the definition of HRD and the parameters that contribute to the determination of HR status. The consortium proposed recommendations and best practices to benefit the broader cancer community. CONCLUSION: Overall, this publication provides additional perspectives for scientist, physician, laboratory, and patient communities to contextualize the definition of HRD and various platforms that are used to measure HRD in tumors.
format Online
Article
Text
id pubmed-8914493
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-89144932022-03-11 Homologous Recombination Deficiency: Concepts, Definitions, and Assays Stewart, Mark D Merino Vega, Diana Arend, Rebecca C Baden, Jonathan F Barbash, Olena Beaubier, Nike Collins, Grace French, Tim Ghahramani, Negar Hinson, Patsy Jelinic, Petar Marton, Matthew J McGregor, Kimberly Parsons, Jerod Ramamurthy, Lakshman Sausen, Mark Sokol, Ethan S Stenzinger, Albrecht Stires, Hillary Timms, Kirsten M Turco, Diana Wang, Iris Williams, J Andrew Wong-Ho, Elaine Allen, Jeff Oncologist Cancer Diagnostics and Molecular Pathology BACKGROUND: Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(adenosine diphosphate [ADP]-ribose) polymerase (PARP) inhibitors and platinum-based chemotherapy, which target the destruction of cancer cells by working in concert with HRD through synthetic lethality. However, to identify patients with these tumors, it is vital to understand how to best measure homologous repair (HR) status and to characterize the level of alignment in these measurements across different diagnostic platforms. A key current challenge is that there is no standardized method to define, measure, and report HR status using diagnostics in the clinical setting. METHODS: Friends of Cancer Research convened a consortium of project partners from key healthcare sectors to address concerns about the lack of consistency in the way HRD is defined and methods for measuring HR status. RESULTS: This publication provides findings from the group’s discussions that identified opportunities to align the definition of HRD and the parameters that contribute to the determination of HR status. The consortium proposed recommendations and best practices to benefit the broader cancer community. CONCLUSION: Overall, this publication provides additional perspectives for scientist, physician, laboratory, and patient communities to contextualize the definition of HRD and various platforms that are used to measure HRD in tumors. Oxford University Press 2022-01-27 /pmc/articles/PMC8914493/ /pubmed/35274707 http://dx.doi.org/10.1093/oncolo/oyab053 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.
spellingShingle Cancer Diagnostics and Molecular Pathology
Stewart, Mark D
Merino Vega, Diana
Arend, Rebecca C
Baden, Jonathan F
Barbash, Olena
Beaubier, Nike
Collins, Grace
French, Tim
Ghahramani, Negar
Hinson, Patsy
Jelinic, Petar
Marton, Matthew J
McGregor, Kimberly
Parsons, Jerod
Ramamurthy, Lakshman
Sausen, Mark
Sokol, Ethan S
Stenzinger, Albrecht
Stires, Hillary
Timms, Kirsten M
Turco, Diana
Wang, Iris
Williams, J Andrew
Wong-Ho, Elaine
Allen, Jeff
Homologous Recombination Deficiency: Concepts, Definitions, and Assays
title Homologous Recombination Deficiency: Concepts, Definitions, and Assays
title_full Homologous Recombination Deficiency: Concepts, Definitions, and Assays
title_fullStr Homologous Recombination Deficiency: Concepts, Definitions, and Assays
title_full_unstemmed Homologous Recombination Deficiency: Concepts, Definitions, and Assays
title_short Homologous Recombination Deficiency: Concepts, Definitions, and Assays
title_sort homologous recombination deficiency: concepts, definitions, and assays
topic Cancer Diagnostics and Molecular Pathology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8914493/
https://www.ncbi.nlm.nih.gov/pubmed/35274707
http://dx.doi.org/10.1093/oncolo/oyab053
work_keys_str_mv AT stewartmarkd homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT merinovegadiana homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT arendrebeccac homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT badenjonathanf homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT barbasholena homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT beaubiernike homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT collinsgrace homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT frenchtim homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT ghahramaninegar homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT hinsonpatsy homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT jelinicpetar homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT martonmatthewj homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT mcgregorkimberly homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT parsonsjerod homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT ramamurthylakshman homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT sausenmark homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT sokolethans homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT stenzingeralbrecht homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT stireshillary homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT timmskirstenm homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT turcodiana homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT wangiris homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT williamsjandrew homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT wonghoelaine homologousrecombinationdeficiencyconceptsdefinitionsandassays
AT allenjeff homologousrecombinationdeficiencyconceptsdefinitionsandassays