Champagne: Automated Whole-Genome Phylogenomic Character Matrix Method Using Large Genomic Indels for Homoplasy-Free Inference

We present Champagne, a whole-genome method for generating character matrices for phylogenomic analysis using large genomic indel events. By rigorously picking orthologous genes and locating large insertion and deletion events, Champagne delivers a character matrix that considerably reduces homoplas...

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Detalles Bibliográficos
Autores principales: Schull, James K, Turakhia, Yatish, Hemker, James A, Dally, William J, Bejerano, Gill
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8920512/
https://www.ncbi.nlm.nih.gov/pubmed/35171243
http://dx.doi.org/10.1093/gbe/evac013

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8920512/
https://www.ncbi.nlm.nih.gov/pubmed/35171243
http://dx.doi.org/10.1093/gbe/evac013

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