Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation

BACKGROUND: The understanding of how microbiomes assemble, function, and evolve requires metagenomic tools that can resolve microbiota compositions at the strain level. However, the identification and tracking of microbial strains in fecal metagenomes is challenging and available tools variably clas...

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Detalles Bibliográficos
Autores principales: Podlesny, Daniel, Arze, Cesar, Dörner, Elisabeth, Verma, Sandeep, Dutta, Sudhir, Walter, Jens, Fricke, W. Florian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8951724/
https://www.ncbi.nlm.nih.gov/pubmed/35337386
http://dx.doi.org/10.1186/s40168-022-01251-w

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8951724/
https://www.ncbi.nlm.nih.gov/pubmed/35337386
http://dx.doi.org/10.1186/s40168-022-01251-w

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