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Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods

This commentary compares 233 CheqSol intrinsic solubility values (log S(0)) reported in the Wiki-pS(0) database for 145 different druglike molecules to the 838 log S(0) values determined mostly by the saturation shake-flask (SSF) method for 124 of the molecules from the CheqSol set. The range of log...

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Autor principal: Avdeef, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Association of Physical Chemists 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8957238/
https://www.ncbi.nlm.nih.gov/pubmed/35350660
http://dx.doi.org/10.5599/admet.698
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author Avdeef, Alex
author_facet Avdeef, Alex
author_sort Avdeef, Alex
collection PubMed
description This commentary compares 233 CheqSol intrinsic solubility values (log S(0)) reported in the Wiki-pS(0) database for 145 different druglike molecules to the 838 log S(0) values determined mostly by the saturation shake-flask (SSF) method for 124 of the molecules from the CheqSol set. The range of log S(0) spans from -1.0 to -10.6 (log molar units), averaging at -3.8. The correlation plot between the two methods indicates r(2) = 0.96, RMSE = 0.34 log unit, and a slight bias of -0.07 log unit. The average interlaboratory standard deviation (SD(i)) is slightly better for the CheqSol set than that of the SSF set: SD(i)(CS) = 0.15 and SD(i)(SSF) = 0.24. The intralaboratory errors reported in the CheqSol method (0.05 log) need to be multiplied by a factor of 3 to match the expected interlaboratory errors for the method. The scale factor, in part, relates to the hidden systematic errors in the single-lab values. It is expected that improved standardizations in the ‘gold standard’ SSF method, as suggested in the recent ‘white paper’ on solubility measurement methodology, should make the SD(i) of both methods be about ~0.15 log unit. The multi-lab averaged log S(0) (and the corresponding SD(i)) values could be helpful additions to existing training-set molecules used to predict the intrinsic solubility of drugs and druglike molecules.
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spelling pubmed-89572382022-03-28 Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods Avdeef, Alex ADMET DMPK Short Communication This commentary compares 233 CheqSol intrinsic solubility values (log S(0)) reported in the Wiki-pS(0) database for 145 different druglike molecules to the 838 log S(0) values determined mostly by the saturation shake-flask (SSF) method for 124 of the molecules from the CheqSol set. The range of log S(0) spans from -1.0 to -10.6 (log molar units), averaging at -3.8. The correlation plot between the two methods indicates r(2) = 0.96, RMSE = 0.34 log unit, and a slight bias of -0.07 log unit. The average interlaboratory standard deviation (SD(i)) is slightly better for the CheqSol set than that of the SSF set: SD(i)(CS) = 0.15 and SD(i)(SSF) = 0.24. The intralaboratory errors reported in the CheqSol method (0.05 log) need to be multiplied by a factor of 3 to match the expected interlaboratory errors for the method. The scale factor, in part, relates to the hidden systematic errors in the single-lab values. It is expected that improved standardizations in the ‘gold standard’ SSF method, as suggested in the recent ‘white paper’ on solubility measurement methodology, should make the SD(i) of both methods be about ~0.15 log unit. The multi-lab averaged log S(0) (and the corresponding SD(i)) values could be helpful additions to existing training-set molecules used to predict the intrinsic solubility of drugs and druglike molecules. International Association of Physical Chemists 2019-06-05 /pmc/articles/PMC8957238/ /pubmed/35350660 http://dx.doi.org/10.5599/admet.698 Text en Copyright © 2019 by the authors. https://creativecommons.org/licenses/by/3.0/This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) ).
spellingShingle Short Communication
Avdeef, Alex
Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods
title Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods
title_full Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods
title_fullStr Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods
title_full_unstemmed Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods
title_short Multi-lab intrinsic solubility measurement reproducibility in CheqSol and shake-flask methods
title_sort multi-lab intrinsic solubility measurement reproducibility in cheqsol and shake-flask methods
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8957238/
https://www.ncbi.nlm.nih.gov/pubmed/35350660
http://dx.doi.org/10.5599/admet.698
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