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The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma
The AlkB family of Fe (II) and α-ketoglutarate-dependent dioxygenases works by removing alkyl substituents from alkylation-damaged nucleic acid bases through oxidative dealkylation, subsequently affecting tumor progression and patient prognosis. However, the specific roles of the AlkB family in Glio...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8965608/ https://www.ncbi.nlm.nih.gov/pubmed/35371987 http://dx.doi.org/10.3389/fonc.2022.847821 |
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author | Feng, Songshan Xu, Zhijie Peng, Jinwu Zhang, Mingyu |
author_facet | Feng, Songshan Xu, Zhijie Peng, Jinwu Zhang, Mingyu |
author_sort | Feng, Songshan |
collection | PubMed |
description | The AlkB family of Fe (II) and α-ketoglutarate-dependent dioxygenases works by removing alkyl substituents from alkylation-damaged nucleic acid bases through oxidative dealkylation, subsequently affecting tumor progression and patient prognosis. However, the specific roles of the AlkB family in Glioblastoma remain to be elucidated. By taking advantage of the abundant bioinformatics databases, such as GEPIA2, cBioPortal and TIMER, we performed a comprehensive analysis of the AlkB family in GBM, and managed to identify the significant prognostic hallmarks and therapeutic targets within this family. We found that the expression levels of ALKBH2 and ALKBH8 were significantly up-regulated in GBM compared with normal tissues. Meanwhile, the patients with high levels of ALKBH2 and ALKBH8 possessed significant poor overall survival (OS). In addition, the results suggested that the biological function of the AlkB family was closely related to DNA damage repair, cell metabolism, cell proliferation and tumor immune infiltration in GBM. Furthermore, the high expression of ALKBH8 in GBM was verified by immunohistochemistry. Taken together, this study could provide meaningful information about the aberrant AlkB family associated with GBM initiation and progression, and help clinicians precisely predict patient survival and select alternative therapeutic drugs. |
format | Online Article Text |
id | pubmed-8965608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89656082022-03-31 The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma Feng, Songshan Xu, Zhijie Peng, Jinwu Zhang, Mingyu Front Oncol Oncology The AlkB family of Fe (II) and α-ketoglutarate-dependent dioxygenases works by removing alkyl substituents from alkylation-damaged nucleic acid bases through oxidative dealkylation, subsequently affecting tumor progression and patient prognosis. However, the specific roles of the AlkB family in Glioblastoma remain to be elucidated. By taking advantage of the abundant bioinformatics databases, such as GEPIA2, cBioPortal and TIMER, we performed a comprehensive analysis of the AlkB family in GBM, and managed to identify the significant prognostic hallmarks and therapeutic targets within this family. We found that the expression levels of ALKBH2 and ALKBH8 were significantly up-regulated in GBM compared with normal tissues. Meanwhile, the patients with high levels of ALKBH2 and ALKBH8 possessed significant poor overall survival (OS). In addition, the results suggested that the biological function of the AlkB family was closely related to DNA damage repair, cell metabolism, cell proliferation and tumor immune infiltration in GBM. Furthermore, the high expression of ALKBH8 in GBM was verified by immunohistochemistry. Taken together, this study could provide meaningful information about the aberrant AlkB family associated with GBM initiation and progression, and help clinicians precisely predict patient survival and select alternative therapeutic drugs. Frontiers Media S.A. 2022-03-10 /pmc/articles/PMC8965608/ /pubmed/35371987 http://dx.doi.org/10.3389/fonc.2022.847821 Text en Copyright © 2022 Feng, Xu, Peng and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Feng, Songshan Xu, Zhijie Peng, Jinwu Zhang, Mingyu The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma |
title | The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma |
title_full | The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma |
title_fullStr | The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma |
title_full_unstemmed | The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma |
title_short | The AlkB Family: Potential Prognostic Biomarkers and Therapeutic Targets in Glioblastoma |
title_sort | alkb family: potential prognostic biomarkers and therapeutic targets in glioblastoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8965608/ https://www.ncbi.nlm.nih.gov/pubmed/35371987 http://dx.doi.org/10.3389/fonc.2022.847821 |
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