Cargando…

DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules

[Image: see text] Aldehyde deformylations occurring in organisms are catalyzed by metalloenzymes through metal–dioxygen active cores, attracting great interest to study small-molecule metal–dioxygen complexes for understanding relevant biological processes and developing biomimetic catalysts for aer...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhao, Ruihua, Zhang, Bei-Bei, Liu, Zheyuan, Cheng, Gui-Juan, Wang, Zhi-Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8970012/
https://www.ncbi.nlm.nih.gov/pubmed/35373207
http://dx.doi.org/10.1021/jacsau.2c00014
_version_ 1784679375172534272
author Zhao, Ruihua
Zhang, Bei-Bei
Liu, Zheyuan
Cheng, Gui-Juan
Wang, Zhi-Xiang
author_facet Zhao, Ruihua
Zhang, Bei-Bei
Liu, Zheyuan
Cheng, Gui-Juan
Wang, Zhi-Xiang
author_sort Zhao, Ruihua
collection PubMed
description [Image: see text] Aldehyde deformylations occurring in organisms are catalyzed by metalloenzymes through metal–dioxygen active cores, attracting great interest to study small-molecule metal–dioxygen complexes for understanding relevant biological processes and developing biomimetic catalysts for aerobic transformations. As the known deformylation mechanisms, including nucleophilic attack, aldehyde α-H-atom abstraction, and aldehyde hydrogen atom abstraction, undergo outer-sphere pathways, we herein report a distinct inner-sphere mechanism based on density functional theory (DFT) mechanistic studies of aldehyde deformylations with a copper (II)–superoxo complex. The inner-sphere mechanism proceeds via a sequence mainly including aldehyde end-on coordination, homolytic aldehyde C–C bond cleavage, and dioxygen O–O bond cleavage, among which the C–C bond cleavage is the rate-determining step with a barrier substantially lower than those of outer-sphere pathways. The aldehyde C–C bond cleavage, enabled through the activation of the dioxygen ligand radical in a second-order nucleophilic substitution (S(N)2)-like fashion, leads to an alkyl radical and facilitates the subsequent dioxygen O–O bond cleavage. Furthermore, we deduced the rules for the reactions of metal–dioxygen complexes with aldehydes and nitriles via the inner-sphere mechanism. Expectedly, our proposed inner-sphere mechanisms and the reaction rules offer another perspective to understand relevant biological processes involving metal–dioxygen cores and to discover metal–dioxygen catalysts for aerobic transformations.
format Online
Article
Text
id pubmed-8970012
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-89700122022-04-01 DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules Zhao, Ruihua Zhang, Bei-Bei Liu, Zheyuan Cheng, Gui-Juan Wang, Zhi-Xiang JACS Au [Image: see text] Aldehyde deformylations occurring in organisms are catalyzed by metalloenzymes through metal–dioxygen active cores, attracting great interest to study small-molecule metal–dioxygen complexes for understanding relevant biological processes and developing biomimetic catalysts for aerobic transformations. As the known deformylation mechanisms, including nucleophilic attack, aldehyde α-H-atom abstraction, and aldehyde hydrogen atom abstraction, undergo outer-sphere pathways, we herein report a distinct inner-sphere mechanism based on density functional theory (DFT) mechanistic studies of aldehyde deformylations with a copper (II)–superoxo complex. The inner-sphere mechanism proceeds via a sequence mainly including aldehyde end-on coordination, homolytic aldehyde C–C bond cleavage, and dioxygen O–O bond cleavage, among which the C–C bond cleavage is the rate-determining step with a barrier substantially lower than those of outer-sphere pathways. The aldehyde C–C bond cleavage, enabled through the activation of the dioxygen ligand radical in a second-order nucleophilic substitution (S(N)2)-like fashion, leads to an alkyl radical and facilitates the subsequent dioxygen O–O bond cleavage. Furthermore, we deduced the rules for the reactions of metal–dioxygen complexes with aldehydes and nitriles via the inner-sphere mechanism. Expectedly, our proposed inner-sphere mechanisms and the reaction rules offer another perspective to understand relevant biological processes involving metal–dioxygen cores and to discover metal–dioxygen catalysts for aerobic transformations. American Chemical Society 2022-02-25 /pmc/articles/PMC8970012/ /pubmed/35373207 http://dx.doi.org/10.1021/jacsau.2c00014 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Zhao, Ruihua
Zhang, Bei-Bei
Liu, Zheyuan
Cheng, Gui-Juan
Wang, Zhi-Xiang
DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules
title DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules
title_full DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules
title_fullStr DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules
title_full_unstemmed DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules
title_short DFT Mechanistic Insights into Aldehyde Deformylations with Biomimetic Metal–Dioxygen Complexes: Distinct Mechanisms and Reaction Rules
title_sort dft mechanistic insights into aldehyde deformylations with biomimetic metal–dioxygen complexes: distinct mechanisms and reaction rules
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8970012/
https://www.ncbi.nlm.nih.gov/pubmed/35373207
http://dx.doi.org/10.1021/jacsau.2c00014
work_keys_str_mv AT zhaoruihua dftmechanisticinsightsintoaldehydedeformylationswithbiomimeticmetaldioxygencomplexesdistinctmechanismsandreactionrules
AT zhangbeibei dftmechanisticinsightsintoaldehydedeformylationswithbiomimeticmetaldioxygencomplexesdistinctmechanismsandreactionrules
AT liuzheyuan dftmechanisticinsightsintoaldehydedeformylationswithbiomimeticmetaldioxygencomplexesdistinctmechanismsandreactionrules
AT chengguijuan dftmechanisticinsightsintoaldehydedeformylationswithbiomimeticmetaldioxygencomplexesdistinctmechanismsandreactionrules
AT wangzhixiang dftmechanisticinsightsintoaldehydedeformylationswithbiomimeticmetaldioxygencomplexesdistinctmechanismsandreactionrules