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mbDenoise: microbiome data denoising using zero-inflated probabilistic principal components analysis

The analysis of microbiome data has several technical challenges. In particular, count matrices contain a large proportion of zeros, some of which are biological, whereas others are technical. Furthermore, the measurements suffer from unequal sequencing depth, overdispersion, and data redundancy. Th...

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Detalles Bibliográficos
Autores principales: Zeng, Yanyan, Li, Jing, Wei, Chaochun, Zhao, Hongyu, Tao, Wang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9011970/
https://www.ncbi.nlm.nih.gov/pubmed/35422001
http://dx.doi.org/10.1186/s13059-022-02657-3