Swapping Metagenomics Preprocessing Pipeline Components Offers Speed and Sensitivity Increases

Increasing data volumes on high-throughput sequencing instruments such as the NovaSeq 6000 leads to long computational bottlenecks for common metagenomics data preprocessing tasks such as adaptor and primer trimming and host removal. Here, we test whether faster recently developed computational tool...

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Detalles Bibliográficos
Autores principales: Armstrong, George, Martino, Cameron, Morris, Justin, Khaleghi, Behnam, Kang, Jaeyoung, DeReus, Jeff, Zhu, Qiyun, Roush, Daniel, McDonald, Daniel, Gonazlez, Antonio, Shaffer, Justin P., Carpenter, Carolina, Estaki, Mehrbod, Wandro, Stephen, Eilert, Sean, Akel, Ameen, Eno, Justin, Curewitz, Ken, Swafford, Austin D., Moshiri, Niema, Rosing, Tajana, Knight, Rob
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Observation
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9040843/
https://www.ncbi.nlm.nih.gov/pubmed/35293792
http://dx.doi.org/10.1128/msystems.01378-21

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9040843/
https://www.ncbi.nlm.nih.gov/pubmed/35293792
http://dx.doi.org/10.1128/msystems.01378-21

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