Cargando…
Comprehensive enhancer-target gene assignments improve gene set level interpretation of genome-wide regulatory data
BACKGROUND: Revealing the gene targets of distal regulatory elements is challenging yet critical for interpreting regulome data. Experiment-derived enhancer-gene links are restricted to a small set of enhancers and/or cell types, while the accuracy of genome-wide approaches remains elusive due to th...
Autores principales: | Qin, Tingting, Lee, Christopher, Li, Shiting, Cavalcante, Raymond G., Orchard, Peter, Yao, Heming, Zhang, Hanrui, Wang, Shuze, Patil, Snehal, Boyle, Alan P., Sartor, Maureen A. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9044877/ https://www.ncbi.nlm.nih.gov/pubmed/35473573 http://dx.doi.org/10.1186/s13059-022-02668-0 |
Ejemplares similares
-
Poly-Enrich: count-based methods for gene set enrichment testing with genomic regions
por: Lee, Christopher T, et al.
Publicado: (2020) -
Broad-Enrich: functional interpretation of large sets of broad genomic regions
por: Cavalcante, Raymond G., et al.
Publicado: (2014) -
Assigning Co-Regulated Human Genes and Regulatory Gene Clusters
por: Strunz, Tobias, et al.
Publicado: (2021) -
Whole-genome CpG-resolution DNA Methylation Profiling of HNSCC Reveals Distinct Mechanisms of Carcinogenesis for Fine-scale HPV+ Cancer Subtypes
por: Qin, Tingting, et al.
Publicado: (2023) -
Molecular Tumor Subtypes of HPV-Positive Head and Neck Cancers: Biological Characteristics and Implications for Clinical Outcomes
por: Qin, Tingting, et al.
Publicado: (2021)