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A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism

The high number of failed pre-clinical and clinical studies for compounds targeting Alzheimer disease (AD) has demonstrated that there is a need to reassess existing strategies. Here, we pursue a holistic, mechanism-centric drug repurposing approach combining computational analytics and experimental...

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Autores principales: Lage-Rupprecht, Vanessa, Schultz, Bruce, Dick, Justus, Namysl, Marcin, Zaliani, Andrea, Gebel, Stephan, Pless, Ole, Reinshagen, Jeanette, Ellinger, Bernhard, Ebeling, Christian, Esser, Alexander, Jacobs, Marc, Claussen, Carsten, Hofmann-Apitius, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9058900/
https://www.ncbi.nlm.nih.gov/pubmed/35510183
http://dx.doi.org/10.1016/j.patter.2021.100433
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author Lage-Rupprecht, Vanessa
Schultz, Bruce
Dick, Justus
Namysl, Marcin
Zaliani, Andrea
Gebel, Stephan
Pless, Ole
Reinshagen, Jeanette
Ellinger, Bernhard
Ebeling, Christian
Esser, Alexander
Jacobs, Marc
Claussen, Carsten
Hofmann-Apitius, Martin
author_facet Lage-Rupprecht, Vanessa
Schultz, Bruce
Dick, Justus
Namysl, Marcin
Zaliani, Andrea
Gebel, Stephan
Pless, Ole
Reinshagen, Jeanette
Ellinger, Bernhard
Ebeling, Christian
Esser, Alexander
Jacobs, Marc
Claussen, Carsten
Hofmann-Apitius, Martin
author_sort Lage-Rupprecht, Vanessa
collection PubMed
description The high number of failed pre-clinical and clinical studies for compounds targeting Alzheimer disease (AD) has demonstrated that there is a need to reassess existing strategies. Here, we pursue a holistic, mechanism-centric drug repurposing approach combining computational analytics and experimental screening data. Based on this integrative workflow, we identified 77 druggable modifiers of tau phosphorylation (pTau). One of the upstream modulators of pTau, HDAC6, was screened with 5,632 drugs in a tau-specific assay, resulting in the identification of 20 repurposing candidates. Four compounds and their known targets were found to have a link to AD-specific genes. Our approach can be applied to a variety of AD-associated pathophysiological mechanisms to identify more repurposing candidates.
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spelling pubmed-90589002022-05-03 A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism Lage-Rupprecht, Vanessa Schultz, Bruce Dick, Justus Namysl, Marcin Zaliani, Andrea Gebel, Stephan Pless, Ole Reinshagen, Jeanette Ellinger, Bernhard Ebeling, Christian Esser, Alexander Jacobs, Marc Claussen, Carsten Hofmann-Apitius, Martin Patterns (N Y) Article The high number of failed pre-clinical and clinical studies for compounds targeting Alzheimer disease (AD) has demonstrated that there is a need to reassess existing strategies. Here, we pursue a holistic, mechanism-centric drug repurposing approach combining computational analytics and experimental screening data. Based on this integrative workflow, we identified 77 druggable modifiers of tau phosphorylation (pTau). One of the upstream modulators of pTau, HDAC6, was screened with 5,632 drugs in a tau-specific assay, resulting in the identification of 20 repurposing candidates. Four compounds and their known targets were found to have a link to AD-specific genes. Our approach can be applied to a variety of AD-associated pathophysiological mechanisms to identify more repurposing candidates. Elsevier 2022-01-26 /pmc/articles/PMC9058900/ /pubmed/35510183 http://dx.doi.org/10.1016/j.patter.2021.100433 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Lage-Rupprecht, Vanessa
Schultz, Bruce
Dick, Justus
Namysl, Marcin
Zaliani, Andrea
Gebel, Stephan
Pless, Ole
Reinshagen, Jeanette
Ellinger, Bernhard
Ebeling, Christian
Esser, Alexander
Jacobs, Marc
Claussen, Carsten
Hofmann-Apitius, Martin
A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism
title A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism
title_full A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism
title_fullStr A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism
title_full_unstemmed A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism
title_short A hybrid approach unveils drug repurposing candidates targeting an Alzheimer pathophysiology mechanism
title_sort hybrid approach unveils drug repurposing candidates targeting an alzheimer pathophysiology mechanism
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9058900/
https://www.ncbi.nlm.nih.gov/pubmed/35510183
http://dx.doi.org/10.1016/j.patter.2021.100433
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