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Evaluating metagenomic assembly approaches for biome-specific gene catalogues

BACKGROUND: For many environments, biome-specific microbial gene catalogues are being recovered using shotgun metagenomics followed by assembly and gene calling on the assembled contigs. The assembly is typically conducted either by individually assembling each sample or by co-assembling reads from...

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Detalles Bibliográficos
Autores principales: Delgado, Luis Fernando, Andersson, Anders F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9074274/
https://www.ncbi.nlm.nih.gov/pubmed/35524337
http://dx.doi.org/10.1186/s40168-022-01259-2