Cargando…

Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether

Glycidyl ethers and their vicinal diols are important building blocks in the organic synthesis of anti-cancer and anti-obesity drugs. Ylehd, an epoxide hydrolase from tropical marine yeast Yarrowia lipolytica, was explored for its enantioselective properties by kinetic, thermodynamic and in silico s...

Descripción completa

Detalles Bibliográficos
Autores principales: Bendigiri, Chandrika, Harini, K., Yenkar, Sajal, Zinjarde, Smita, Sowdhamini, R., RaviKumar, Ameeta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9079618/
https://www.ncbi.nlm.nih.gov/pubmed/35541265
http://dx.doi.org/10.1039/c8ra00628h
_version_ 1784702597619253248
author Bendigiri, Chandrika
Harini, K.
Yenkar, Sajal
Zinjarde, Smita
Sowdhamini, R.
RaviKumar, Ameeta
author_facet Bendigiri, Chandrika
Harini, K.
Yenkar, Sajal
Zinjarde, Smita
Sowdhamini, R.
RaviKumar, Ameeta
author_sort Bendigiri, Chandrika
collection PubMed
description Glycidyl ethers and their vicinal diols are important building blocks in the organic synthesis of anti-cancer and anti-obesity drugs. Ylehd, an epoxide hydrolase from tropical marine yeast Yarrowia lipolytica, was explored for its enantioselective properties by kinetic, thermodynamic and in silico studies. Kinetic resolution of racemic phenyl glycidyl ether (PGE) yielded (S)-epoxide while for benzyl glycidyl ether (BGE) (R)-epoxide was obtained, with vicinal diols of the opposite configuration. Amongst the enantiomers of PGE and BGE, the (S)-selective conversion of benzyl glycidyl ether to its corresponding diol, (S)-3-benzyloxy-1,2-propanediol while retaining (R)-BGE was most favourable with 95% ee in 20 min. Enantioselective conversion of specific enantiomer of BGE to its corresponding diols was attributed to the favourable kinetic and thermodynamic parameters as well as to the number and proximity of water molecules near the base H325 in the active site pocket. The easily available and highly active Ylehd could be a potential biocatalyst for large scale preparation of pharmaceutically relevant chiral (R)-benzyl glycidyl ether and (S)-3-benzyloxy-1,2-propanediol.
format Online
Article
Text
id pubmed-9079618
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-90796182022-05-09 Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether Bendigiri, Chandrika Harini, K. Yenkar, Sajal Zinjarde, Smita Sowdhamini, R. RaviKumar, Ameeta RSC Adv Chemistry Glycidyl ethers and their vicinal diols are important building blocks in the organic synthesis of anti-cancer and anti-obesity drugs. Ylehd, an epoxide hydrolase from tropical marine yeast Yarrowia lipolytica, was explored for its enantioselective properties by kinetic, thermodynamic and in silico studies. Kinetic resolution of racemic phenyl glycidyl ether (PGE) yielded (S)-epoxide while for benzyl glycidyl ether (BGE) (R)-epoxide was obtained, with vicinal diols of the opposite configuration. Amongst the enantiomers of PGE and BGE, the (S)-selective conversion of benzyl glycidyl ether to its corresponding diol, (S)-3-benzyloxy-1,2-propanediol while retaining (R)-BGE was most favourable with 95% ee in 20 min. Enantioselective conversion of specific enantiomer of BGE to its corresponding diols was attributed to the favourable kinetic and thermodynamic parameters as well as to the number and proximity of water molecules near the base H325 in the active site pocket. The easily available and highly active Ylehd could be a potential biocatalyst for large scale preparation of pharmaceutically relevant chiral (R)-benzyl glycidyl ether and (S)-3-benzyloxy-1,2-propanediol. The Royal Society of Chemistry 2018-04-06 /pmc/articles/PMC9079618/ /pubmed/35541265 http://dx.doi.org/10.1039/c8ra00628h Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Bendigiri, Chandrika
Harini, K.
Yenkar, Sajal
Zinjarde, Smita
Sowdhamini, R.
RaviKumar, Ameeta
Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
title Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
title_full Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
title_fullStr Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
title_full_unstemmed Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
title_short Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
title_sort evaluating ylehd, a recombinant epoxide hydrolase from yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9079618/
https://www.ncbi.nlm.nih.gov/pubmed/35541265
http://dx.doi.org/10.1039/c8ra00628h
work_keys_str_mv AT bendigirichandrika evaluatingylehdarecombinantepoxidehydrolasefromyarrowialipolyticaasapotentialbiocatalystfortheresolutionofbenzylglycidylether
AT harinik evaluatingylehdarecombinantepoxidehydrolasefromyarrowialipolyticaasapotentialbiocatalystfortheresolutionofbenzylglycidylether
AT yenkarsajal evaluatingylehdarecombinantepoxidehydrolasefromyarrowialipolyticaasapotentialbiocatalystfortheresolutionofbenzylglycidylether
AT zinjardesmita evaluatingylehdarecombinantepoxidehydrolasefromyarrowialipolyticaasapotentialbiocatalystfortheresolutionofbenzylglycidylether
AT sowdhaminir evaluatingylehdarecombinantepoxidehydrolasefromyarrowialipolyticaasapotentialbiocatalystfortheresolutionofbenzylglycidylether
AT ravikumarameeta evaluatingylehdarecombinantepoxidehydrolasefromyarrowialipolyticaasapotentialbiocatalystfortheresolutionofbenzylglycidylether