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SMC complexes: Lifting the lid on loop extrusion
Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how struct...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9089308/ https://www.ncbi.nlm.nih.gov/pubmed/35016058 http://dx.doi.org/10.1016/j.ceb.2021.12.003 |
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author | Higashi, Torahiko L. Uhlmann, Frank |
author_facet | Higashi, Torahiko L. Uhlmann, Frank |
author_sort | Higashi, Torahiko L. |
collection | PubMed |
description | Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how structural insight into the SMC complex cohesin has led to a molecular framework for both activities: a Brownian ratchet motion, associated with topological DNA entry, might repeat itself to elicit loop extrusion. After contrasting alternative loop extrusion models, we explore whether topological loading or loop extrusion is more adept at explaining in vivo SMC complex function. SMC variants that experimentally separate topological loading from loop extrusion will in the future probe their respective contributions to chromosome biology. |
format | Online Article Text |
id | pubmed-9089308 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-90893082022-06-07 SMC complexes: Lifting the lid on loop extrusion Higashi, Torahiko L. Uhlmann, Frank Curr Opin Cell Biol Article Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how structural insight into the SMC complex cohesin has led to a molecular framework for both activities: a Brownian ratchet motion, associated with topological DNA entry, might repeat itself to elicit loop extrusion. After contrasting alternative loop extrusion models, we explore whether topological loading or loop extrusion is more adept at explaining in vivo SMC complex function. SMC variants that experimentally separate topological loading from loop extrusion will in the future probe their respective contributions to chromosome biology. Elsevier 2022-02 /pmc/articles/PMC9089308/ /pubmed/35016058 http://dx.doi.org/10.1016/j.ceb.2021.12.003 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Higashi, Torahiko L. Uhlmann, Frank SMC complexes: Lifting the lid on loop extrusion |
title | SMC complexes: Lifting the lid on loop extrusion |
title_full | SMC complexes: Lifting the lid on loop extrusion |
title_fullStr | SMC complexes: Lifting the lid on loop extrusion |
title_full_unstemmed | SMC complexes: Lifting the lid on loop extrusion |
title_short | SMC complexes: Lifting the lid on loop extrusion |
title_sort | smc complexes: lifting the lid on loop extrusion |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9089308/ https://www.ncbi.nlm.nih.gov/pubmed/35016058 http://dx.doi.org/10.1016/j.ceb.2021.12.003 |
work_keys_str_mv | AT higashitorahikol smccomplexesliftingthelidonloopextrusion AT uhlmannfrank smccomplexesliftingthelidonloopextrusion |