Cargando…

SMC complexes: Lifting the lid on loop extrusion

Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how struct...

Descripción completa

Detalles Bibliográficos
Autores principales: Higashi, Torahiko L., Uhlmann, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9089308/
https://www.ncbi.nlm.nih.gov/pubmed/35016058
http://dx.doi.org/10.1016/j.ceb.2021.12.003
_version_ 1784704488418836480
author Higashi, Torahiko L.
Uhlmann, Frank
author_facet Higashi, Torahiko L.
Uhlmann, Frank
author_sort Higashi, Torahiko L.
collection PubMed
description Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how structural insight into the SMC complex cohesin has led to a molecular framework for both activities: a Brownian ratchet motion, associated with topological DNA entry, might repeat itself to elicit loop extrusion. After contrasting alternative loop extrusion models, we explore whether topological loading or loop extrusion is more adept at explaining in vivo SMC complex function. SMC variants that experimentally separate topological loading from loop extrusion will in the future probe their respective contributions to chromosome biology.
format Online
Article
Text
id pubmed-9089308
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-90893082022-06-07 SMC complexes: Lifting the lid on loop extrusion Higashi, Torahiko L. Uhlmann, Frank Curr Opin Cell Biol Article Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how structural insight into the SMC complex cohesin has led to a molecular framework for both activities: a Brownian ratchet motion, associated with topological DNA entry, might repeat itself to elicit loop extrusion. After contrasting alternative loop extrusion models, we explore whether topological loading or loop extrusion is more adept at explaining in vivo SMC complex function. SMC variants that experimentally separate topological loading from loop extrusion will in the future probe their respective contributions to chromosome biology. Elsevier 2022-02 /pmc/articles/PMC9089308/ /pubmed/35016058 http://dx.doi.org/10.1016/j.ceb.2021.12.003 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Higashi, Torahiko L.
Uhlmann, Frank
SMC complexes: Lifting the lid on loop extrusion
title SMC complexes: Lifting the lid on loop extrusion
title_full SMC complexes: Lifting the lid on loop extrusion
title_fullStr SMC complexes: Lifting the lid on loop extrusion
title_full_unstemmed SMC complexes: Lifting the lid on loop extrusion
title_short SMC complexes: Lifting the lid on loop extrusion
title_sort smc complexes: lifting the lid on loop extrusion
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9089308/
https://www.ncbi.nlm.nih.gov/pubmed/35016058
http://dx.doi.org/10.1016/j.ceb.2021.12.003
work_keys_str_mv AT higashitorahikol smccomplexesliftingthelidonloopextrusion
AT uhlmannfrank smccomplexesliftingthelidonloopextrusion