Cargando…

Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3

PSD95-PDZ3, the third PDZ domain of the post-synaptic density-95 protein (MW 11 kDa), undergoes a peculiar three-state thermal denaturation (N ↔ I(n) ↔ D) and is amyloidogenic. PSD95-PDZ3 in the intermediate state (I) is reversibly oligomerized (RO: Reversible oligomerization). We previously reporte...

Descripción completa

Detalles Bibliográficos
Autores principales: Onchaiya, Sawaros, Saotome, Tomonori, Mizutani, Kenji, Martinez, Jose C., Tame, Jeremy R. H., Kidokoro, Shun-ichi, Kuroda, Yutaka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103278/
https://www.ncbi.nlm.nih.gov/pubmed/35566161
http://dx.doi.org/10.3390/molecules27092813
_version_ 1784707521938718720
author Onchaiya, Sawaros
Saotome, Tomonori
Mizutani, Kenji
Martinez, Jose C.
Tame, Jeremy R. H.
Kidokoro, Shun-ichi
Kuroda, Yutaka
author_facet Onchaiya, Sawaros
Saotome, Tomonori
Mizutani, Kenji
Martinez, Jose C.
Tame, Jeremy R. H.
Kidokoro, Shun-ichi
Kuroda, Yutaka
author_sort Onchaiya, Sawaros
collection PubMed
description PSD95-PDZ3, the third PDZ domain of the post-synaptic density-95 protein (MW 11 kDa), undergoes a peculiar three-state thermal denaturation (N ↔ I(n) ↔ D) and is amyloidogenic. PSD95-PDZ3 in the intermediate state (I) is reversibly oligomerized (RO: Reversible oligomerization). We previously reported a point mutation (F340A) that inhibits both ROs and amyloidogenesis and constructed the PDZ3-F340A variant. Here, we “reverse engineered” PDZ3-F340A for inducing high-temperature RO and amyloidogenesis. We produced three variants (R309L, E310L, and N326L), where we individually mutated hydrophilic residues exposed at the surface of the monomeric PDZ3-F340A but buried in the tetrameric crystal structure to a hydrophobic leucine. Differential scanning calorimetry indicated that two of the designed variants (PDZ3-F340A/R309L and E310L) denatured according to the two-state model. On the other hand, PDZ3-F340A/N326L denatured according to a three-state model and produced high-temperature ROs. The secondary structures of PDZ3-F340A/N326L and PDZ3-wt in the RO state were unfolded according to circular dichroism and differential scanning calorimetry. Furthermore, PDZ3-F340A/N326L was amyloidogenic as assessed by Thioflavin T fluorescence. Altogether, these results demonstrate that a single amino acid mutation can trigger the formation of high-temperature RO and concurrent amyloidogenesis.
format Online
Article
Text
id pubmed-9103278
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-91032782022-05-14 Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3 Onchaiya, Sawaros Saotome, Tomonori Mizutani, Kenji Martinez, Jose C. Tame, Jeremy R. H. Kidokoro, Shun-ichi Kuroda, Yutaka Molecules Article PSD95-PDZ3, the third PDZ domain of the post-synaptic density-95 protein (MW 11 kDa), undergoes a peculiar three-state thermal denaturation (N ↔ I(n) ↔ D) and is amyloidogenic. PSD95-PDZ3 in the intermediate state (I) is reversibly oligomerized (RO: Reversible oligomerization). We previously reported a point mutation (F340A) that inhibits both ROs and amyloidogenesis and constructed the PDZ3-F340A variant. Here, we “reverse engineered” PDZ3-F340A for inducing high-temperature RO and amyloidogenesis. We produced three variants (R309L, E310L, and N326L), where we individually mutated hydrophilic residues exposed at the surface of the monomeric PDZ3-F340A but buried in the tetrameric crystal structure to a hydrophobic leucine. Differential scanning calorimetry indicated that two of the designed variants (PDZ3-F340A/R309L and E310L) denatured according to the two-state model. On the other hand, PDZ3-F340A/N326L denatured according to a three-state model and produced high-temperature ROs. The secondary structures of PDZ3-F340A/N326L and PDZ3-wt in the RO state were unfolded according to circular dichroism and differential scanning calorimetry. Furthermore, PDZ3-F340A/N326L was amyloidogenic as assessed by Thioflavin T fluorescence. Altogether, these results demonstrate that a single amino acid mutation can trigger the formation of high-temperature RO and concurrent amyloidogenesis. MDPI 2022-04-28 /pmc/articles/PMC9103278/ /pubmed/35566161 http://dx.doi.org/10.3390/molecules27092813 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Onchaiya, Sawaros
Saotome, Tomonori
Mizutani, Kenji
Martinez, Jose C.
Tame, Jeremy R. H.
Kidokoro, Shun-ichi
Kuroda, Yutaka
Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3
title Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3
title_full Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3
title_fullStr Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3
title_full_unstemmed Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3
title_short Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3
title_sort reverse engineering analysis of the high-temperature reversible oligomerization and amyloidogenicity of psd95-pdz3
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103278/
https://www.ncbi.nlm.nih.gov/pubmed/35566161
http://dx.doi.org/10.3390/molecules27092813
work_keys_str_mv AT onchaiyasawaros reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3
AT saotometomonori reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3
AT mizutanikenji reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3
AT martinezjosec reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3
AT tamejeremyrh reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3
AT kidokoroshunichi reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3
AT kurodayutaka reverseengineeringanalysisofthehightemperaturereversibleoligomerizationandamyloidogenicityofpsd95pdz3