MetaSquare: an integrated metadatabase of 16S rRNA gene amplicon for microbiome taxonomic classification

MOTIVATION: Taxonomic classification of 16S ribosomal RNA gene amplicon is an efficient and economic approach in microbiome analysis. 16S rRNA sequence databases like SILVA, RDP, EzBioCloud and HOMD used in downstream bioinformatic pipelines have limitations on either the sequence redundancy or the...

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Detalles Bibliográficos
Autores principales: Liao, Chun-Chieh, Fu, Po-Ying, Huang, Chih-Wei, Chuang, Chia-Hsien, Yen, Yun, Lin, Chung-Yen, Chen, Shu-Hwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113242/
https://www.ncbi.nlm.nih.gov/pubmed/35561196
http://dx.doi.org/10.1093/bioinformatics/btac184

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113242/
https://www.ncbi.nlm.nih.gov/pubmed/35561196
http://dx.doi.org/10.1093/bioinformatics/btac184

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