spatzie: an R package for identifying significant transcription factor motif co-enrichment from enhancer–promoter interactions

Genomic interactions provide important context to our understanding of the state of the genome. One question is whether specific transcription factor interactions give rise to genome organization. We introduce spatzie, an R package and a website that implements statistical tests for significant tran...

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Detalles Bibliográficos
Autores principales: Hammelman, Jennifer, Krismer, Konstantin, Gifford, David K
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Methods Online
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9122533/
https://www.ncbi.nlm.nih.gov/pubmed/35100401
http://dx.doi.org/10.1093/nar/gkac036

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9122533/
https://www.ncbi.nlm.nih.gov/pubmed/35100401
http://dx.doi.org/10.1093/nar/gkac036

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