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Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
G protein-coupled receptors (GPCRs) induce signal transduction pathways through coupling to four main subtypes of G proteins (G(s), G(i), G(q), and G(12/13)), selectively. However, G protein selective activation mechanisms and residual determinants in GPCRs have remained obscure. Herein, we performe...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Life Science Alliance LLC
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133432/ https://www.ncbi.nlm.nih.gov/pubmed/35613896 http://dx.doi.org/10.26508/lsa.202201439 |
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author | Selçuk, Berkay Erol, Ismail Durdağı, Serdar Adebali, Ogün |
author_facet | Selçuk, Berkay Erol, Ismail Durdağı, Serdar Adebali, Ogün |
author_sort | Selçuk, Berkay |
collection | PubMed |
description | G protein-coupled receptors (GPCRs) induce signal transduction pathways through coupling to four main subtypes of G proteins (G(s), G(i), G(q), and G(12/13)), selectively. However, G protein selective activation mechanisms and residual determinants in GPCRs have remained obscure. Herein, we performed extensive phylogenetic analysis and identified specifically conserved residues for the aminergic receptors having similar coupling profiles. By integrating our methodology of differential evolutionary conservation of G protein–specific amino acids with structural analyses, we identified specific activation networks for G(s), G(i1), G(o), and G(q). To validate that these networks could determine coupling selectivity we further analyzed G(s)-specific activation network and its association with G(s) selectivity. Through molecular dynamics simulations, we showed that previously uncharacterized Glycine at position 7x41 plays an important role in receptor activation and it may determine G(s) coupling selectivity by facilitating a larger TM6 movement. Finally, we gathered our results into a comprehensive model of G protein selectivity called “sequential switches of activation” describing three main molecular switches controlling GPCR activation: ligand binding, G protein selective activation mechanisms, and G protein contact. |
format | Online Article Text |
id | pubmed-9133432 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Life Science Alliance LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-91334322022-09-14 Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs Selçuk, Berkay Erol, Ismail Durdağı, Serdar Adebali, Ogün Life Sci Alliance Research Articles G protein-coupled receptors (GPCRs) induce signal transduction pathways through coupling to four main subtypes of G proteins (G(s), G(i), G(q), and G(12/13)), selectively. However, G protein selective activation mechanisms and residual determinants in GPCRs have remained obscure. Herein, we performed extensive phylogenetic analysis and identified specifically conserved residues for the aminergic receptors having similar coupling profiles. By integrating our methodology of differential evolutionary conservation of G protein–specific amino acids with structural analyses, we identified specific activation networks for G(s), G(i1), G(o), and G(q). To validate that these networks could determine coupling selectivity we further analyzed G(s)-specific activation network and its association with G(s) selectivity. Through molecular dynamics simulations, we showed that previously uncharacterized Glycine at position 7x41 plays an important role in receptor activation and it may determine G(s) coupling selectivity by facilitating a larger TM6 movement. Finally, we gathered our results into a comprehensive model of G protein selectivity called “sequential switches of activation” describing three main molecular switches controlling GPCR activation: ligand binding, G protein selective activation mechanisms, and G protein contact. Life Science Alliance LLC 2022-05-25 /pmc/articles/PMC9133432/ /pubmed/35613896 http://dx.doi.org/10.26508/lsa.202201439 Text en © 2022 Selçuk et al. https://creativecommons.org/licenses/by/4.0/This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Articles Selçuk, Berkay Erol, Ismail Durdağı, Serdar Adebali, Ogün Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs |
title | Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs |
title_full | Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs |
title_fullStr | Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs |
title_full_unstemmed | Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs |
title_short | Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs |
title_sort | evolutionary association of receptor-wide amino acids with g protein–coupling selectivity in aminergic gpcrs |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133432/ https://www.ncbi.nlm.nih.gov/pubmed/35613896 http://dx.doi.org/10.26508/lsa.202201439 |
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