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Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs

G protein-coupled receptors (GPCRs) induce signal transduction pathways through coupling to four main subtypes of G proteins (G(s), G(i), G(q), and G(12/13)), selectively. However, G protein selective activation mechanisms and residual determinants in GPCRs have remained obscure. Herein, we performe...

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Detalles Bibliográficos
Autores principales: Selçuk, Berkay, Erol, Ismail, Durdağı, Serdar, Adebali, Ogün
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Life Science Alliance LLC 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133432/
https://www.ncbi.nlm.nih.gov/pubmed/35613896
http://dx.doi.org/10.26508/lsa.202201439
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author Selçuk, Berkay
Erol, Ismail
Durdağı, Serdar
Adebali, Ogün
author_facet Selçuk, Berkay
Erol, Ismail
Durdağı, Serdar
Adebali, Ogün
author_sort Selçuk, Berkay
collection PubMed
description G protein-coupled receptors (GPCRs) induce signal transduction pathways through coupling to four main subtypes of G proteins (G(s), G(i), G(q), and G(12/13)), selectively. However, G protein selective activation mechanisms and residual determinants in GPCRs have remained obscure. Herein, we performed extensive phylogenetic analysis and identified specifically conserved residues for the aminergic receptors having similar coupling profiles. By integrating our methodology of differential evolutionary conservation of G protein–specific amino acids with structural analyses, we identified specific activation networks for G(s), G(i1), G(o), and G(q). To validate that these networks could determine coupling selectivity we further analyzed G(s)-specific activation network and its association with G(s) selectivity. Through molecular dynamics simulations, we showed that previously uncharacterized Glycine at position 7x41 plays an important role in receptor activation and it may determine G(s) coupling selectivity by facilitating a larger TM6 movement. Finally, we gathered our results into a comprehensive model of G protein selectivity called “sequential switches of activation” describing three main molecular switches controlling GPCR activation: ligand binding, G protein selective activation mechanisms, and G protein contact.
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spelling pubmed-91334322022-09-14 Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs Selçuk, Berkay Erol, Ismail Durdağı, Serdar Adebali, Ogün Life Sci Alliance Research Articles G protein-coupled receptors (GPCRs) induce signal transduction pathways through coupling to four main subtypes of G proteins (G(s), G(i), G(q), and G(12/13)), selectively. However, G protein selective activation mechanisms and residual determinants in GPCRs have remained obscure. Herein, we performed extensive phylogenetic analysis and identified specifically conserved residues for the aminergic receptors having similar coupling profiles. By integrating our methodology of differential evolutionary conservation of G protein–specific amino acids with structural analyses, we identified specific activation networks for G(s), G(i1), G(o), and G(q). To validate that these networks could determine coupling selectivity we further analyzed G(s)-specific activation network and its association with G(s) selectivity. Through molecular dynamics simulations, we showed that previously uncharacterized Glycine at position 7x41 plays an important role in receptor activation and it may determine G(s) coupling selectivity by facilitating a larger TM6 movement. Finally, we gathered our results into a comprehensive model of G protein selectivity called “sequential switches of activation” describing three main molecular switches controlling GPCR activation: ligand binding, G protein selective activation mechanisms, and G protein contact. Life Science Alliance LLC 2022-05-25 /pmc/articles/PMC9133432/ /pubmed/35613896 http://dx.doi.org/10.26508/lsa.202201439 Text en © 2022 Selçuk et al. https://creativecommons.org/licenses/by/4.0/This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Articles
Selçuk, Berkay
Erol, Ismail
Durdağı, Serdar
Adebali, Ogün
Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
title Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
title_full Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
title_fullStr Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
title_full_unstemmed Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
title_short Evolutionary association of receptor-wide amino acids with G protein–coupling selectivity in aminergic GPCRs
title_sort evolutionary association of receptor-wide amino acids with g protein–coupling selectivity in aminergic gpcrs
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133432/
https://www.ncbi.nlm.nih.gov/pubmed/35613896
http://dx.doi.org/10.26508/lsa.202201439
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