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A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase

[Image: see text] We report a new pathway to synthesize pyrano[2,3-c]pyrazoles and their binding mode to p38 MAP kinase. Pyrano[2,3-c]pyrazole derivatives have been prepared through a four-component reaction of benzyl alcohols, ethyl acetoacetate, phenylhydrazine, and malononitrile in the presence o...

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Autores principales: Nguyen, Hai Truong, Truong, Minh-Nhat Ha, Le, Tan Van, Vo, Nam Tri, Nguyen, Hoang Duc, Tran, Phuong Hoang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9134431/
https://www.ncbi.nlm.nih.gov/pubmed/35647469
http://dx.doi.org/10.1021/acsomega.2c01814
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author Nguyen, Hai Truong
Truong, Minh-Nhat Ha
Le, Tan Van
Vo, Nam Tri
Nguyen, Hoang Duc
Tran, Phuong Hoang
author_facet Nguyen, Hai Truong
Truong, Minh-Nhat Ha
Le, Tan Van
Vo, Nam Tri
Nguyen, Hoang Duc
Tran, Phuong Hoang
author_sort Nguyen, Hai Truong
collection PubMed
description [Image: see text] We report a new pathway to synthesize pyrano[2,3-c]pyrazoles and their binding mode to p38 MAP kinase. Pyrano[2,3-c]pyrazole derivatives have been prepared through a four-component reaction of benzyl alcohols, ethyl acetoacetate, phenylhydrazine, and malononitrile in the presence of sulfonated amorphous carbon and eosin Y as catalysts. All products were characterized by melting point, (1)H and (13)C NMR, and HRMS (ESI). The products were screened in silico for their binding activities to both the ATP-binding pocket and the lipid-binding pocket of p38 MAP kinase, using a structure-based flexible docking provided by the engine ADFR. The results showed that eight synthesized compounds had a higher affinity to the lipid pocket than to the other target site, which implied potential applications as allosteric inhibitors. Finally, the most biologically active compound, 5, had a binding affinity comparable to those of other proven lipid pocket inhibitors, with affinity to the target pocket reaching −10.9932 kcal/mol, and also had the best binding affinity to the ATP-binding pockets in all of our products. Thus, our research provides a novel pathway for synthesizing pyrano[2,3-c]pyrazoles and bioinformatic evidence for their biological capability to block p38 MAP kinase pockets, which could be useful for developing cancer or immune drugs.
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spelling pubmed-91344312022-05-27 A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase Nguyen, Hai Truong Truong, Minh-Nhat Ha Le, Tan Van Vo, Nam Tri Nguyen, Hoang Duc Tran, Phuong Hoang ACS Omega [Image: see text] We report a new pathway to synthesize pyrano[2,3-c]pyrazoles and their binding mode to p38 MAP kinase. Pyrano[2,3-c]pyrazole derivatives have been prepared through a four-component reaction of benzyl alcohols, ethyl acetoacetate, phenylhydrazine, and malononitrile in the presence of sulfonated amorphous carbon and eosin Y as catalysts. All products were characterized by melting point, (1)H and (13)C NMR, and HRMS (ESI). The products were screened in silico for their binding activities to both the ATP-binding pocket and the lipid-binding pocket of p38 MAP kinase, using a structure-based flexible docking provided by the engine ADFR. The results showed that eight synthesized compounds had a higher affinity to the lipid pocket than to the other target site, which implied potential applications as allosteric inhibitors. Finally, the most biologically active compound, 5, had a binding affinity comparable to those of other proven lipid pocket inhibitors, with affinity to the target pocket reaching −10.9932 kcal/mol, and also had the best binding affinity to the ATP-binding pockets in all of our products. Thus, our research provides a novel pathway for synthesizing pyrano[2,3-c]pyrazoles and bioinformatic evidence for their biological capability to block p38 MAP kinase pockets, which could be useful for developing cancer or immune drugs. American Chemical Society 2022-05-11 /pmc/articles/PMC9134431/ /pubmed/35647469 http://dx.doi.org/10.1021/acsomega.2c01814 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Nguyen, Hai Truong
Truong, Minh-Nhat Ha
Le, Tan Van
Vo, Nam Tri
Nguyen, Hoang Duc
Tran, Phuong Hoang
A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase
title A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase
title_full A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase
title_fullStr A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase
title_full_unstemmed A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase
title_short A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase
title_sort new pathway for the preparation of pyrano[2,3-c]pyrazoles and molecular docking as inhibitors of p38 map kinase
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9134431/
https://www.ncbi.nlm.nih.gov/pubmed/35647469
http://dx.doi.org/10.1021/acsomega.2c01814
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