nf-gwas-pipeline: A Nextflow Genome-Wide Association Study Pipeline

A tool for conducting Genome-Wide Association Study (GWAS) in a systematic, automated and reproducible manner is overdue. We developed an automated GWAS pipeline by combining multiple analysis tools – including bcftools, vcftools, the R packages SNPRelate/GENESIS/GMMAT and ANNOVAR – through Nextflow...

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Detalles Bibliográficos
Autores principales: Song, Zeyuan, Gurinovich, Anastasia, Federico, Anthony, Monti, Stefano, Sebastiani, Paola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9137404/
https://www.ncbi.nlm.nih.gov/pubmed/35647481
http://dx.doi.org/10.21105/joss.02957

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9137404/
https://www.ncbi.nlm.nih.gov/pubmed/35647481
http://dx.doi.org/10.21105/joss.02957

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