ePeak: from replicated chromatin profiling data to epigenomic dynamics

We present ePeak, a Snakemake-based pipeline for the identification and quantification of reproducible peaks from raw ChIP-seq, CUT&RUN and CUT&Tag epigenomic profiling techniques. It also includes a statistical module to perform tailored differential marking and binding analysis with state...

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Detalles Bibliográficos
Autores principales: Daunesse, Maëlle, Legendre, Rachel, Varet, Hugo, Pain, Adrien, Chica, Claudia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Application Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9154330/
https://www.ncbi.nlm.nih.gov/pubmed/35664802
http://dx.doi.org/10.1093/nargab/lqac041

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9154330/
https://www.ncbi.nlm.nih.gov/pubmed/35664802
http://dx.doi.org/10.1093/nargab/lqac041

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