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Can we infer tumor presence of single cell transcriptomes and their tumor of origin from bulk transcriptomes by machine learning?

There is a growing need to build a model that uses single cell RNA-seq (scRNA-seq) to separate malignant cells from nonmalignant cells and to identify tumor of origin of single cells and/or circulating tumor cells (CTCs). Currently, it is infeasible to build a tumor of origin model learnt from scRNA...

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Detalles Bibliográficos
Autores principales: Liu, Hua-Ping, Wang, Dongwen, Lai, Hung-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9162953/
https://www.ncbi.nlm.nih.gov/pubmed/35685355
http://dx.doi.org/10.1016/j.csbj.2022.05.035