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Calculating small-angle scattering intensity functions from electron-microscopy images

We outline procedures to calculate small-angle scattering (SAS) intensity functions from 2-dimensional electron-microscopy (EM) images. Two types of scattering systems were considered: (a) the sample is a set of particles confined to a plane; or (b) the sample is modelled as parallel, infinitely lon...

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Detalles Bibliográficos
Autores principales: Yildirim, Batuhan, Washington, Adam, Doutch, James, Cole, Jacqueline M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9169464/
https://www.ncbi.nlm.nih.gov/pubmed/35754871
http://dx.doi.org/10.1039/d2ra00685e
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author Yildirim, Batuhan
Washington, Adam
Doutch, James
Cole, Jacqueline M.
author_facet Yildirim, Batuhan
Washington, Adam
Doutch, James
Cole, Jacqueline M.
author_sort Yildirim, Batuhan
collection PubMed
description We outline procedures to calculate small-angle scattering (SAS) intensity functions from 2-dimensional electron-microscopy (EM) images. Two types of scattering systems were considered: (a) the sample is a set of particles confined to a plane; or (b) the sample is modelled as parallel, infinitely long cylinders that extend into the image plane. In each case, an EM image is segmented into particle instances and the background, whereby coordinates and morphological parameters are computed and used to calculate the constituents of the SAS-intensity function. We compare our results with experimental SAS data, discuss limitations, both general and case specific, and outline some applications of this method which could potentially complement experimental SAS.
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spelling pubmed-91694642022-06-23 Calculating small-angle scattering intensity functions from electron-microscopy images Yildirim, Batuhan Washington, Adam Doutch, James Cole, Jacqueline M. RSC Adv Chemistry We outline procedures to calculate small-angle scattering (SAS) intensity functions from 2-dimensional electron-microscopy (EM) images. Two types of scattering systems were considered: (a) the sample is a set of particles confined to a plane; or (b) the sample is modelled as parallel, infinitely long cylinders that extend into the image plane. In each case, an EM image is segmented into particle instances and the background, whereby coordinates and morphological parameters are computed and used to calculate the constituents of the SAS-intensity function. We compare our results with experimental SAS data, discuss limitations, both general and case specific, and outline some applications of this method which could potentially complement experimental SAS. The Royal Society of Chemistry 2022-06-06 /pmc/articles/PMC9169464/ /pubmed/35754871 http://dx.doi.org/10.1039/d2ra00685e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Yildirim, Batuhan
Washington, Adam
Doutch, James
Cole, Jacqueline M.
Calculating small-angle scattering intensity functions from electron-microscopy images
title Calculating small-angle scattering intensity functions from electron-microscopy images
title_full Calculating small-angle scattering intensity functions from electron-microscopy images
title_fullStr Calculating small-angle scattering intensity functions from electron-microscopy images
title_full_unstemmed Calculating small-angle scattering intensity functions from electron-microscopy images
title_short Calculating small-angle scattering intensity functions from electron-microscopy images
title_sort calculating small-angle scattering intensity functions from electron-microscopy images
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9169464/
https://www.ncbi.nlm.nih.gov/pubmed/35754871
http://dx.doi.org/10.1039/d2ra00685e
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