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Benchmarking the topological accuracy of bacterial phylogenomic workflows using in silico evolution

Phylogenetic analyses are widely used in microbiological research, for example to trace the progression of bacterial outbreaks based on whole-genome sequencing data. In practice, multiple analysis steps such as de novo assembly, alignment and phylogenetic inference are combined to form phylogenetic...

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Detalles Bibliográficos
Autores principales: van der Putten, Boas C. L., Huijsmans, Niek A. H., Mende, Daniel R., Schultsz, Constance
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9176278/
https://www.ncbi.nlm.nih.gov/pubmed/35290758
http://dx.doi.org/10.1099/mgen.0.000799