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A transcriptome software comparison for the analyses of treatments expected to give subtle gene expression responses
BACKGROUND: In this comparative study we evaluate the performance of four software tools: DNAstar-D (DESeq2), DNAstar-E (edgeR), CLC Genomics and Partek Flow for identification of differentially expressed genes (DEGs) using a transcriptome of E. coli. The RNA-seq data are from the effect of below-ba...
| Autores principales: | , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2022
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9208185/ https://www.ncbi.nlm.nih.gov/pubmed/35725382 http://dx.doi.org/10.1186/s12864-022-08673-8 |