Proposal of Smith-Waterman algorithm on FPGA to accelerate the forward and backtracking steps

In bioinformatics, alignment is an essential technique for finding similarities between biological sequences. Usually, the alignment is performed with the Smith-Waterman (SW) algorithm, a well-known sequence alignment technique of high-level precision based on dynamic programming. However, given the...

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Detalles Bibliográficos
Autores principales: de Oliveira, Fabio F., Dias, Leonardo A., Fernandes, Marcelo A. C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9246398/
https://www.ncbi.nlm.nih.gov/pubmed/35772072
http://dx.doi.org/10.1371/journal.pone.0254736

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9246398/
https://www.ncbi.nlm.nih.gov/pubmed/35772072
http://dx.doi.org/10.1371/journal.pone.0254736

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