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KOMB: K-core based de novo characterization of copy number variation in microbiomes
Characterizing metagenomes via kmer-based, database-dependent taxonomic classification has yielded key insights into underlying microbiome dynamics. However, novel approaches are needed to track community dynamics and genomic flux within metagenomes, particularly in response to perturbations. We des...
Autores principales: | Balaji, Advait, Sapoval, Nicolae, Seto, Charlie, Leo Elworth, R.A., Fu, Yilei, Nute, Michael G., Savidge, Tor, Segarra, Santiago, Treangen, Todd J. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9249589/ https://www.ncbi.nlm.nih.gov/pubmed/35832621 http://dx.doi.org/10.1016/j.csbj.2022.06.019 |
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