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A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks

Single molecule imaging has shown that part of actin disassembles within a few seconds after incorporation into the dendritic filament network in lamellipodia, suggestive of frequent destabilization near barbed ends. To investigate the mechanisms behind network remodeling, we created a stochastic mo...

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Detalles Bibliográficos
Autores principales: Holz, Danielle, Hall, Aaron R, Usukura, Eiji, Yamashiro, Sawako, Watanabe, Naoki, Vavylonis, Dimitrios
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252579/
https://www.ncbi.nlm.nih.gov/pubmed/35670664
http://dx.doi.org/10.7554/eLife.69031
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author Holz, Danielle
Hall, Aaron R
Usukura, Eiji
Yamashiro, Sawako
Watanabe, Naoki
Vavylonis, Dimitrios
author_facet Holz, Danielle
Hall, Aaron R
Usukura, Eiji
Yamashiro, Sawako
Watanabe, Naoki
Vavylonis, Dimitrios
author_sort Holz, Danielle
collection PubMed
description Single molecule imaging has shown that part of actin disassembles within a few seconds after incorporation into the dendritic filament network in lamellipodia, suggestive of frequent destabilization near barbed ends. To investigate the mechanisms behind network remodeling, we created a stochastic model with polymerization, depolymerization, branching, capping, uncapping, severing, oligomer diffusion, annealing, and debranching. We find that filament severing, enhanced near barbed ends, can explain the single molecule actin lifetime distribution, if oligomer fragments reanneal to free ends with rate constants comparable to in vitro measurements. The same mechanism leads to actin networks consistent with measured filament, end, and branch concentrations. These networks undergo structural remodeling, leading to longer filaments away from the leading edge, at the +/-35° orientation pattern. Imaging of actin speckle lifetimes at sub-second resolution verifies frequent disassembly of newly-assembled actin. We thus propose a unified mechanism that fits a diverse set of basic lamellipodia phenomenology.
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spelling pubmed-92525792022-07-05 A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks Holz, Danielle Hall, Aaron R Usukura, Eiji Yamashiro, Sawako Watanabe, Naoki Vavylonis, Dimitrios eLife Cell Biology Single molecule imaging has shown that part of actin disassembles within a few seconds after incorporation into the dendritic filament network in lamellipodia, suggestive of frequent destabilization near barbed ends. To investigate the mechanisms behind network remodeling, we created a stochastic model with polymerization, depolymerization, branching, capping, uncapping, severing, oligomer diffusion, annealing, and debranching. We find that filament severing, enhanced near barbed ends, can explain the single molecule actin lifetime distribution, if oligomer fragments reanneal to free ends with rate constants comparable to in vitro measurements. The same mechanism leads to actin networks consistent with measured filament, end, and branch concentrations. These networks undergo structural remodeling, leading to longer filaments away from the leading edge, at the +/-35° orientation pattern. Imaging of actin speckle lifetimes at sub-second resolution verifies frequent disassembly of newly-assembled actin. We thus propose a unified mechanism that fits a diverse set of basic lamellipodia phenomenology. eLife Sciences Publications, Ltd 2022-06-07 /pmc/articles/PMC9252579/ /pubmed/35670664 http://dx.doi.org/10.7554/eLife.69031 Text en © 2022, Holz et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Cell Biology
Holz, Danielle
Hall, Aaron R
Usukura, Eiji
Yamashiro, Sawako
Watanabe, Naoki
Vavylonis, Dimitrios
A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
title A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
title_full A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
title_fullStr A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
title_full_unstemmed A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
title_short A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
title_sort mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
topic Cell Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252579/
https://www.ncbi.nlm.nih.gov/pubmed/35670664
http://dx.doi.org/10.7554/eLife.69031
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