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A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks
Single molecule imaging has shown that part of actin disassembles within a few seconds after incorporation into the dendritic filament network in lamellipodia, suggestive of frequent destabilization near barbed ends. To investigate the mechanisms behind network remodeling, we created a stochastic mo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252579/ https://www.ncbi.nlm.nih.gov/pubmed/35670664 http://dx.doi.org/10.7554/eLife.69031 |
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author | Holz, Danielle Hall, Aaron R Usukura, Eiji Yamashiro, Sawako Watanabe, Naoki Vavylonis, Dimitrios |
author_facet | Holz, Danielle Hall, Aaron R Usukura, Eiji Yamashiro, Sawako Watanabe, Naoki Vavylonis, Dimitrios |
author_sort | Holz, Danielle |
collection | PubMed |
description | Single molecule imaging has shown that part of actin disassembles within a few seconds after incorporation into the dendritic filament network in lamellipodia, suggestive of frequent destabilization near barbed ends. To investigate the mechanisms behind network remodeling, we created a stochastic model with polymerization, depolymerization, branching, capping, uncapping, severing, oligomer diffusion, annealing, and debranching. We find that filament severing, enhanced near barbed ends, can explain the single molecule actin lifetime distribution, if oligomer fragments reanneal to free ends with rate constants comparable to in vitro measurements. The same mechanism leads to actin networks consistent with measured filament, end, and branch concentrations. These networks undergo structural remodeling, leading to longer filaments away from the leading edge, at the +/-35° orientation pattern. Imaging of actin speckle lifetimes at sub-second resolution verifies frequent disassembly of newly-assembled actin. We thus propose a unified mechanism that fits a diverse set of basic lamellipodia phenomenology. |
format | Online Article Text |
id | pubmed-9252579 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-92525792022-07-05 A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks Holz, Danielle Hall, Aaron R Usukura, Eiji Yamashiro, Sawako Watanabe, Naoki Vavylonis, Dimitrios eLife Cell Biology Single molecule imaging has shown that part of actin disassembles within a few seconds after incorporation into the dendritic filament network in lamellipodia, suggestive of frequent destabilization near barbed ends. To investigate the mechanisms behind network remodeling, we created a stochastic model with polymerization, depolymerization, branching, capping, uncapping, severing, oligomer diffusion, annealing, and debranching. We find that filament severing, enhanced near barbed ends, can explain the single molecule actin lifetime distribution, if oligomer fragments reanneal to free ends with rate constants comparable to in vitro measurements. The same mechanism leads to actin networks consistent with measured filament, end, and branch concentrations. These networks undergo structural remodeling, leading to longer filaments away from the leading edge, at the +/-35° orientation pattern. Imaging of actin speckle lifetimes at sub-second resolution verifies frequent disassembly of newly-assembled actin. We thus propose a unified mechanism that fits a diverse set of basic lamellipodia phenomenology. eLife Sciences Publications, Ltd 2022-06-07 /pmc/articles/PMC9252579/ /pubmed/35670664 http://dx.doi.org/10.7554/eLife.69031 Text en © 2022, Holz et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Cell Biology Holz, Danielle Hall, Aaron R Usukura, Eiji Yamashiro, Sawako Watanabe, Naoki Vavylonis, Dimitrios A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
title | A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
title_full | A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
title_fullStr | A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
title_full_unstemmed | A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
title_short | A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
title_sort | mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks |
topic | Cell Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252579/ https://www.ncbi.nlm.nih.gov/pubmed/35670664 http://dx.doi.org/10.7554/eLife.69031 |
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