Cargando…

R-loop Mapping and Characterization During Drosophila Embryogenesis Reveals Developmental Plasticity in R-loop Signatures

R-loops are involved in transcriptional regulation, DNA and histone post-translational modifications, genome replication and genome stability. To what extent R-loop abundance and genome-wide localization is actively regulated during metazoan embryogenesis is unknown. Drosophila embryogenesis provide...

Descripción completa

Detalles Bibliográficos
Autores principales:	Munden, Alexander, Benton, Mary Lauren, Capra, John A., Nordman, Jared T.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9254486/ https://www.ncbi.nlm.nih.gov/pubmed/35609632 http://dx.doi.org/10.1016/j.jmb.2022.167645

Ejemplares similares

R-loopDB: a database for R-loop forming sequences (RLFS) and R-loops
por: Jenjaroenpun, Piroon, et al.
Publicado: (2017)

Quality-controlled R-loop meta-analysis reveals the characteristics of R-loop consensus regions
por: Miller, Henry E, et al.
Publicado: (2022)

Genome-wide mapping reveals R-loops associated with centromeric repeats in maize
por: Liu, Yang, et al.
Publicado: (2021)

Sex-specific variation in R-loop formation in Drosophila melanogaster
por: Stanek, Timothy J., et al.
Publicado: (2022)

Exploration and analysis of R-loop mapping data with RLBase
por: Miller, Henry E, et al.
Publicado: (2022)

Rif1 inhibits replication fork progression and controls DNA copy number in Drosophila
por: Munden, Alexander, et al.
Publicado: (2018)

The mitochondrial R-loop
por: Holt, Ian J
Publicado: (2019)

R-Loops and R-Loop-Binding Proteins in Cancer Progression and Drug Resistance
por: Elsakrmy, Noha, et al.
Publicado: (2023)

Strengths and Weaknesses of the Current Strategies to Map and Characterize R-Loops
por: Vanoosthuyse, Vincent
Publicado: (2018)

Nucleoporins facilitate ORC loading onto chromatin
por: Richards, Logan, et al.
Publicado: (2022)

Identification of replication fork-associated proteins in Drosophila embryos and cultured cells using iPOND coupled to quantitative mass spectrometry
por: Munden, Alexander, et al.
Publicado: (2022)

R-loopBase: a knowledgebase for genome-wide R-loop formation and regulation
por: Lin, Ruoyao, et al.
Publicado: (2021)

R-loops modulate Trypanosome antigenic variation
por: Prister, Lauren L., et al.
Publicado: (2018)

R-Loops Enhance Polycomb Repression at a Subset of Developmental Regulator Genes
por: Skourti-Stathaki, Konstantina, et al.
Publicado: (2019)

R-loops in neuronal aging
por: Hall, Hana
Publicado: (2023)

R-loop induced G-quadruplex in non-template promotes transcription by successive R-loop formation
por: Lee, Chun-Ying, et al.
Publicado: (2020)

Mitochondrial RNase H1 activity regulates R-loop homeostasis to maintain genome integrity and enable early embryogenesis in Arabidopsis
por: Cheng, Lingling, et al.
Publicado: (2021)

R-loops highlight the nucleus in ALS
por: Salvi, Jayesh S, et al.
Publicado: (2015)

R-Loops in Genome Instability and Cancer
por: Li, Fang, et al.
Publicado: (2023)

Helicases in R-loop Formation and Resolution
por: Yang, Shizhuo, et al.
Publicado: (2023)

TonEBP recognizes R-loops and initiates m6A RNA methylation for R-loop resolution
por: Kang, Hyun Je, et al.
Publicado: (2020)

R-Loop Tracker: Web Access-Based Tool for R-Loop Detection and Analysis in Genomic DNA Sequences
por: Brázda, Václav, et al.
Publicado: (2021)

TDP-43 mutations link Amyotrophic Lateral Sclerosis with R-loop homeostasis and R loop-mediated DNA damage
por: Giannini, Marta, et al.
Publicado: (2020)

Mapping Native R-Loops Genome-wide Using a Targeted Nuclease Approach
por: Yan, Qingqing, et al.
Publicado: (2019)

Two-loop electroweak contributions to $\Delta r$
por: Freitas, A., et al.
Publicado: (2001)

R-Loop Formation In Trans at an AGGAG Repeat
por: Toriumi, Kazuya, et al.
Publicado: (2013)

R-loops in bacterial transcription: Their causes and consequences
por: Gowrishankar, J, et al.
Publicado: (2013)

Out of Balance: R-loops in Human Disease
por: Groh, Matthias, et al.
Publicado: (2014)

R Loops in the Regulation of Antibody Gene Diversification
por: Pavri, Rushad
Publicado: (2017)

Replisome bypass of transcription complexes and R-loops
por: Brüning, Jan-Gert, et al.
Publicado: (2020)

The makings of TERRA R-loops at chromosome ends
por: Fernandes, Rita Valador, et al.
Publicado: (2021)

Drosophila Embryogenesis Scales Uniformly across Temperature in Developmentally Diverse Species
por: Kuntz, Steven G., et al.
Publicado: (2014)

Genome-wide mapping reveals conserved and diverged R-loop activities in the unusual genetic landscape of the African trypanosome genome
por: Briggs, Emma, et al.
Publicado: (2018)

Genome-wide map of R-loops reveals its interplay with transcription and genome integrity during germ cell meiosis
por: Jiang, Yu, et al.
Publicado: (2022)

Toward predictive R-loop computational biology: genome-scale prediction of R-loops reveals their association with complex promoter structures, G-quadruplexes and transcriptionally active enhancers
por: Kuznetsov, Vladimir A, et al.
Publicado: (2018)

Toward predictive R-loop computational biology: genome-scale prediction of R-loops reveals their association with complex promoter structures, G-quadruplexes and transcriptionally active enhancers
por: Kuznetsov, Vladimir A, et al.
Publicado: (2018)

On the R and R$_{\tau}$ ratios at the five-loop level of perturbative QCD
por: Samuel, Mark A
Publicado: (1993)

The intrinsic ability of double-stranded DNA to carry out D-loop and R-loop formation
por: Shibata, Takehiko, et al.
Publicado: (2020)

The R369 Myosin Residue within Loop 4 Is Critical for Actin Binding and Muscle Function in Drosophila
por: Trujillo, Adriana S., et al.
Publicado: (2022)

Uses of vessel loops in plastic surgery
por: Singh, Hardeep, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_k8fv5j4th66gmh73ekib9qencl