The evaluation of Bcftools mpileup and GATK HaplotypeCaller for variant calling in non-human species

Identification of genetic variations is a central part of population and quantitative genomics studies based on high-throughput sequencing data. Even though popular variant callers such as Bcftools mpileup and GATK HaplotypeCaller were developed nearly 10 years ago, their performance is still largel...

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Detalles Bibliográficos
Autores principales: Lefouili, Messaoud, Nam, Kiwoong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9256665/
https://www.ncbi.nlm.nih.gov/pubmed/35790846
http://dx.doi.org/10.1038/s41598-022-15563-2

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9256665/
https://www.ncbi.nlm.nih.gov/pubmed/35790846
http://dx.doi.org/10.1038/s41598-022-15563-2

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