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The evaluation of Bcftools mpileup and GATK HaplotypeCaller for variant calling in non-human species
Identification of genetic variations is a central part of population and quantitative genomics studies based on high-throughput sequencing data. Even though popular variant callers such as Bcftools mpileup and GATK HaplotypeCaller were developed nearly 10 years ago, their performance is still largel...
Autores principales: | Lefouili, Messaoud, Nam, Kiwoong |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9256665/ https://www.ncbi.nlm.nih.gov/pubmed/35790846 http://dx.doi.org/10.1038/s41598-022-15563-2 |
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