Cargando…

Benchmarking of 5 algorithms for high-resolution genotyping of human leukocyte antigen class I genes from blood and tissue samples

BACKGROUND: Specific alterations in human leukocyte antigen class I (HLA-I) loci are associated with clinical outcomes for immune checkpoint inhibitors, which increase the clinical relevance of accurate high-resolution HLA genotyping in immuno-oncology applications. Numerous algorithms have been dev...

Descripción completa

Detalles Bibliográficos
Autores principales:	Xin, Hua, Li, Jiurong, Sun, Hongbin, Zhao, Nan, Yao, Bing, Zhong, Wenwen, Ma, Bo, Wang, Dejuan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	AME Publishing Company 2022
Materias:	Original Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263794/ https://www.ncbi.nlm.nih.gov/pubmed/35813337 http://dx.doi.org/10.21037/atm-22-875

Ejemplares similares

Association of human leukocyte antigens Class I and Class II antigens with chronic periodontitis in East India
por: Chowdhury, Mona, et al.
Publicado: (2017)

Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data
por: Claeys, Arne, et al.
Publicado: (2023)

Sequence-Based Genotyping of Expressed Swine Leukocyte Antigen Class I Alleles by Next-Generation Sequencing Reveal Novel Swine Leukocyte Antigen Class I Haplotypes and Alleles in Belgian, Danish, and Kenyan Fattening Pigs and Göttingen Minipigs
por: Sørensen, Maria Rathmann, et al.
Publicado: (2017)

Benchmarking the Human Leukocyte Antigen Typing Performance of Three Assays and Seven Next-Generation Sequencing-Based Algorithms
por: Liu, Ping, et al.
Publicado: (2021)

Human Leukocyte Antigen Class I and II Alleles and Cervical Adenocarcinoma
por: Safaeian, Mahboobeh, et al.
Publicado: (2014)

Human Leukocyte Antigen (HLA) class I and II datasets for sudanese
por: Dafalla, Ameer Mohamed, et al.
Publicado: (2019)

Endo-lysosomal assembly variations among human leukocyte antigen class I (HLA class I) allotypes
por: Olson, Eli, et al.
Publicado: (2023)

Specific human leukocyte antigen class I genotypes predict prognosis in resected pancreatic adenocarcinoma: a retrospective cohort study
por: Wen, Chenlei, et al.
Publicado: (2023)

Non-classical human leukocyte antigen class I in Tunisian children with autism
por: KHARRAT, NAJLA, et al.
Publicado: (2020)

Diversity of the Swine Leukocyte Antigen Class I and II in Commercial Pig Populations
por: Techakriengkrai, Navapon, et al.
Publicado: (2021)

Human Leukocyte Antigen Class I and Class II Polymorphisms and Serum Cytokine Profiles in Cervical Cancer
por: Bahls, Larissa, et al.
Publicado: (2017)

High Resolution Human Leukocyte Antigen Class I Allele Frequencies and HIV-1 Infection Associations in Chinese Han and Uyghur Cohorts
por: Liu, Yanhou, et al.
Publicado: (2012)

High resolution human leukocyte antigen (HLA) class I and class II allele typing in Mexican mestizo women with sporadic breast cancer: case-control study
por: Cantú de León, David, et al.
Publicado: (2009)

Suppression of class I human histocompatibility leukocyte antigen by c- myc is locus specific
Publicado: (1989)

Analysis of the role of human leukocyte antigen class-I genes to understand the etiopathology of schizophrenia
por: Singh, Bisu, et al.
Publicado: (2008)

Human Leukocyte Antigen-Class I Alleles and the Autoreactive T Cell Response in Psoriasis Pathogenesis
por: Prinz, Jörg Christoph
Publicado: (2018)

Allotype-Specific Glycosylation and Cellular Localization of Human Leukocyte Antigen Class I Proteins
por: Hoek, Max, et al.
Publicado: (2021)

Interlaboratory Comparison of the Results of Lifecodes LSA Class I and Class II Single Antigen Kits for Human Leukocyte Antigen Antibody Detection
por: Oh, Eun-Jee, et al.
Publicado: (2015)

Molecular Basis of Human Leukocyte Antigen Class II
por: Charron, Dominique
Publicado: (1990)

A New Human Leukocyte Antigen Typing Algorithm Combined With Currently Available Genotyping Tools Based on Next-Generation Sequencing Data and Guidelines to Select the Most Likely Human Leukocyte Antigen Genotype
por: Lee, Miseon, et al.
Publicado: (2021)

Molecular analysis of human leukocyte antigen class I and class II allele frequencies and haplotype distribution in Pakistani population
por: Moatter, T., et al.
Publicado: (2010)

Importance of Human Leukocyte Antigen (HLA) Class I and II Alleles on the Risk of Multiple Sclerosis
por: Link, Jenny, et al.
Publicado: (2012)

Patients on the Transplant Waiting List Have Anti-Swine Leukocyte Antigen Class I Antibodies
por: Wang, Zheng-Yu, et al.
Publicado: (2023)

Proteome Sampling by the HLA Class I Antigen Processing Pathway
por: Hoof, Ilka, et al.
Publicado: (2012)

High-Throughput High-Resolution Class I HLA Genotyping in East Africa
por: Koehler, Rebecca N., et al.
Publicado: (2010)

Evaluation of Human Leukocyte Antigen Class I and Class II in End-Stage Renal Disease Occurrence in Indonesian Transplantation Patients
por: Susianti, Hani, et al.
Publicado: (2021)

Consensus classification of human leukocyte antigen class II proteins
por: Saha, Indrajit, et al.
Publicado: (2012)

Natural soluble human leukocyte antigen class I in donor serum neutralizes donor-specific HLA alloantibodies in recipient serum
por: Won, Dong Il, et al.
Publicado: (2020)

CD8+ T-Cell Repertoire in Human Leukocyte Antigen Class I-Mismatched Alloreactive Immune Response
por: Bettens, Florence, et al.
Publicado: (2021)

Association of Human Leukocyte Antigen Class I Polymorphism with Spontaneous Clearance of Hepatitis B Surface Antigen in Qidong Han Population
por: Miao, Fengqin, et al.
Publicado: (2013)

Mass Spectrometry of Human Leukocyte Antigen Class I Peptidomes Reveals Strong Effects of Protein Abundance and Turnover on Antigen Presentation
por: Bassani-Sternberg, Michal, et al.
Publicado: (2015)

Melanoma and Human Leukocyte Antigen (HLA): Immunogenicity of 69 HLA Class I Alleles With 11 Antigens Expressed in Melanoma Tumors
por: Georgopoulos, Apostolos P, et al.
Publicado: (2023)

Human Leukocyte Antigen-DQ Genotyping in Pediatric Celiac Disease
por: Pareek, Stuti, et al.
Publicado: (2023)

Human leukocyte antigen class I and class II alleles are associated with susceptibility and resistance in borderline leprosy patients from Southeast Brazil
por: de Souza-Santana, Fabiana Covolo, et al.
Publicado: (2015)

Association of human leukocyte antigen class I and class II alleles and haplotypes in COVID-19 infection in a western Indian population
por: Tripathy, Anuradha S., et al.
Publicado: (2023)

Human leukocyte antigen class 1 genotype distribution and analysis in persons with active tuberculosis and household contacts from Central Uganda
por: Buteme, Helen K., et al.
Publicado: (2016)

Expression of classical human leukocyte antigen class I antigens, HLA‐E and HLA‐G, is adversely prognostic in pancreatic cancer patients
por: Hiraoka, Nobuyoshi, et al.
Publicado: (2020)

Charge-based interactions through peptide position 4 drive diversity of antigen presentation by human leukocyte antigen class I molecules
por: Jackson, Kyle R, et al.
Publicado: (2022)

Study Design: Human Leukocyte Antigen Class I Molecule A(∗)02-Chimeric Antigen Receptor Regulatory T Cells in Renal Transplantation
por: Schreeb, Katharina, et al.
Publicado: (2022)

Erratum to: Consensus classification of human leukocyte antigen class II proteins
por: Saha, Indrajit, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_gslolj88nvegmoiu541s570780