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Loop detection using Hi-C data with HiCExplorer

BACKGROUND: Chromatin loops are an essential factor in the structural organization of the genome; however, their detection in Hi-C interaction matrices is a challenging and compute-intensive task. The approach presented here, integrated into the HiCExplorer software, shows a chromatin loop detection...

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Detalles Bibliográficos
Autores principales: Wolff, Joachim, Backofen, Rolf, Grüning, Björn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270730/
https://www.ncbi.nlm.nih.gov/pubmed/35809047
http://dx.doi.org/10.1093/gigascience/giac061