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Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase

When overexpressed as an immature enzyme in the mesophilic bacterium Escherichia coli, recombinant homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii (StHSD) was markedly activated by heat treatment. Both the apo- and holo-forms of the immature enzyme were successiv...

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Autores principales: Kubota, Tatsuya, Kurihara, Erika, Watanabe, Kazuya, Ogata, Kohei, Kaneko, Ryosuke, Goto, Masaru, Ohshima, Toshihisa, Yoshimune, Kazuaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9283420/
https://www.ncbi.nlm.nih.gov/pubmed/35835834
http://dx.doi.org/10.1038/s42003-022-03656-7
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author Kubota, Tatsuya
Kurihara, Erika
Watanabe, Kazuya
Ogata, Kohei
Kaneko, Ryosuke
Goto, Masaru
Ohshima, Toshihisa
Yoshimune, Kazuaki
author_facet Kubota, Tatsuya
Kurihara, Erika
Watanabe, Kazuya
Ogata, Kohei
Kaneko, Ryosuke
Goto, Masaru
Ohshima, Toshihisa
Yoshimune, Kazuaki
author_sort Kubota, Tatsuya
collection PubMed
description When overexpressed as an immature enzyme in the mesophilic bacterium Escherichia coli, recombinant homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii (StHSD) was markedly activated by heat treatment. Both the apo- and holo-forms of the immature enzyme were successively crystallized, and the two structures were determined. Comparison among the structures of the immature enzyme and previously reported structures of mature enzymes revealed that a conformational change in a flexible part (residues 160–190) of the enzyme, which encloses substrates within the substrate-binding pocket, is smaller in the immature enzyme. The immature enzyme, but not the mature enzyme, formed a complex that included NADP(+), despite its absence during crystallization. This indicates that the opening to the substrate-binding pocket in the immature enzyme is not sufficient for substrate-binding, efficient catalytic turnover or release of NADP(+). Thus, specific conformational changes within the catalytic region appear to be responsible for heat-induced activation.
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spelling pubmed-92834202022-07-16 Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase Kubota, Tatsuya Kurihara, Erika Watanabe, Kazuya Ogata, Kohei Kaneko, Ryosuke Goto, Masaru Ohshima, Toshihisa Yoshimune, Kazuaki Commun Biol Article When overexpressed as an immature enzyme in the mesophilic bacterium Escherichia coli, recombinant homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii (StHSD) was markedly activated by heat treatment. Both the apo- and holo-forms of the immature enzyme were successively crystallized, and the two structures were determined. Comparison among the structures of the immature enzyme and previously reported structures of mature enzymes revealed that a conformational change in a flexible part (residues 160–190) of the enzyme, which encloses substrates within the substrate-binding pocket, is smaller in the immature enzyme. The immature enzyme, but not the mature enzyme, formed a complex that included NADP(+), despite its absence during crystallization. This indicates that the opening to the substrate-binding pocket in the immature enzyme is not sufficient for substrate-binding, efficient catalytic turnover or release of NADP(+). Thus, specific conformational changes within the catalytic region appear to be responsible for heat-induced activation. Nature Publishing Group UK 2022-07-14 /pmc/articles/PMC9283420/ /pubmed/35835834 http://dx.doi.org/10.1038/s42003-022-03656-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kubota, Tatsuya
Kurihara, Erika
Watanabe, Kazuya
Ogata, Kohei
Kaneko, Ryosuke
Goto, Masaru
Ohshima, Toshihisa
Yoshimune, Kazuaki
Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
title Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
title_full Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
title_fullStr Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
title_full_unstemmed Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
title_short Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
title_sort conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9283420/
https://www.ncbi.nlm.nih.gov/pubmed/35835834
http://dx.doi.org/10.1038/s42003-022-03656-7
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