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NGS allele counts versus called genotypes for testing genetic association

RNA sequence data are commonly summarized as read counts. By contrast, so far there is no alternative to genotype calling for investigating the relationship between genetic variants determined by next-generation sequencing (NGS) and a phenotype of interest. Here we propose and evaluate the direct an...

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Detalles Bibliográficos
Autores principales: González Silos, Rosa, Fischer, Christine, Lorenzo Bermejo, Justo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9294184/
https://www.ncbi.nlm.nih.gov/pubmed/35891781
http://dx.doi.org/10.1016/j.csbj.2022.07.016