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Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule

Protein seldom performs biological activities in isolation. Understanding the protein–protein interactions’ physical rewiring in response to pathological conditions or pathogen infection can help advance our comprehension of disease etiology, progression, and pathogenesis, which allow us to explore...

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Autores principales: Agrahari, Ashish Kumar, Dikshit, Madhu, Asthana, Shailendra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9294202/
https://www.ncbi.nlm.nih.gov/pubmed/35891784
http://dx.doi.org/10.1016/j.csbj.2022.07.008
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author Agrahari, Ashish Kumar
Dikshit, Madhu
Asthana, Shailendra
author_facet Agrahari, Ashish Kumar
Dikshit, Madhu
Asthana, Shailendra
author_sort Agrahari, Ashish Kumar
collection PubMed
description Protein seldom performs biological activities in isolation. Understanding the protein–protein interactions’ physical rewiring in response to pathological conditions or pathogen infection can help advance our comprehension of disease etiology, progression, and pathogenesis, which allow us to explore the alternate route to control the regulation of key target interactions, timely and effectively. Nonalcoholic steatohepatitis (NASH) is now a global public health problem exacerbated due to the lack of appropriate treatments. The most advanced anti-NASH lead compound (selonsertib) is withdrawn, though it is able to inhibit its target Apoptosis signal-regulating kinase 1 (ASK1) completely, indicating the necessity to explore alternate routes rather than complete inhibition. Understanding the interaction fingerprints of endogenous regulators at the molecular level that underpin disease formation and progression may spur the rationale of designing therapeutic strategies. Based on our analysis and thorough literature survey of the various key regulators and PTMs, the current review emphasizes PPI-based drug discovery’s relevance for NASH conditions. The lack of structural detail (interface sites) of ASK1 and its regulators makes it challenging to characterize the PPI interfaces. This review summarizes key regulators interaction fingerprinting of ASK1, which can be explored further to restore the homeostasis from its hyperactive states for therapeutics intervention against NASH.
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spelling pubmed-92942022022-07-25 Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule Agrahari, Ashish Kumar Dikshit, Madhu Asthana, Shailendra Comput Struct Biotechnol J Review Protein seldom performs biological activities in isolation. Understanding the protein–protein interactions’ physical rewiring in response to pathological conditions or pathogen infection can help advance our comprehension of disease etiology, progression, and pathogenesis, which allow us to explore the alternate route to control the regulation of key target interactions, timely and effectively. Nonalcoholic steatohepatitis (NASH) is now a global public health problem exacerbated due to the lack of appropriate treatments. The most advanced anti-NASH lead compound (selonsertib) is withdrawn, though it is able to inhibit its target Apoptosis signal-regulating kinase 1 (ASK1) completely, indicating the necessity to explore alternate routes rather than complete inhibition. Understanding the interaction fingerprints of endogenous regulators at the molecular level that underpin disease formation and progression may spur the rationale of designing therapeutic strategies. Based on our analysis and thorough literature survey of the various key regulators and PTMs, the current review emphasizes PPI-based drug discovery’s relevance for NASH conditions. The lack of structural detail (interface sites) of ASK1 and its regulators makes it challenging to characterize the PPI interfaces. This review summarizes key regulators interaction fingerprinting of ASK1, which can be explored further to restore the homeostasis from its hyperactive states for therapeutics intervention against NASH. Research Network of Computational and Structural Biotechnology 2022-07-11 /pmc/articles/PMC9294202/ /pubmed/35891784 http://dx.doi.org/10.1016/j.csbj.2022.07.008 Text en © 2022 Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Review
Agrahari, Ashish Kumar
Dikshit, Madhu
Asthana, Shailendra
Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule
title Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule
title_full Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule
title_fullStr Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule
title_full_unstemmed Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule
title_short Crystallographic mining of ASK1 regulators to unravel the intricate PPI interfaces for the discovery of small molecule
title_sort crystallographic mining of ask1 regulators to unravel the intricate ppi interfaces for the discovery of small molecule
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9294202/
https://www.ncbi.nlm.nih.gov/pubmed/35891784
http://dx.doi.org/10.1016/j.csbj.2022.07.008
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