Software Choice and Sequencing Coverage Can Impact Plastid Genome Assembly–A Case Study in the Narrow Endemic Calligonum bakuense

Most plastid genome sequences are assembled from short-read whole-genome sequencing data, yet the impact that sequencing coverage and the choice of assembly software can have on the accuracy of the resulting assemblies is poorly understood. In this study, we test the impact of both factors on plasti...

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Detalles Bibliográficos
Autores principales: Giorgashvili, Eka, Reichel, Katja, Caswara, Calvinna, Kerimov, Vuqar, Borsch, Thomas, Gruenstaeudl, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Plant Science
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9296850/
https://www.ncbi.nlm.nih.gov/pubmed/35874012
http://dx.doi.org/10.3389/fpls.2022.779830

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9296850/
https://www.ncbi.nlm.nih.gov/pubmed/35874012
http://dx.doi.org/10.3389/fpls.2022.779830

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