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Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)

Hydrogen gas, H(2), is generated in serpentinizing hydrothermal systems, where it has supplied electrons and energy for microbial communities since there was liquid water on Earth. In modern metabolism, H(2) is converted by hydrogenases into organically bound hydrides (H(–)), for example, the cofact...

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Autores principales: Henriques Pereira, Delfina P., Leethaus, Jana, Beyazay, Tugce, do Nascimento Vieira, Andrey, Kleinermanns, Karl, Tüysüz, Harun, Martin, William F., Preiner, Martina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9306933/
https://www.ncbi.nlm.nih.gov/pubmed/34923745
http://dx.doi.org/10.1111/febs.16329
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author Henriques Pereira, Delfina P.
Leethaus, Jana
Beyazay, Tugce
do Nascimento Vieira, Andrey
Kleinermanns, Karl
Tüysüz, Harun
Martin, William F.
Preiner, Martina
author_facet Henriques Pereira, Delfina P.
Leethaus, Jana
Beyazay, Tugce
do Nascimento Vieira, Andrey
Kleinermanns, Karl
Tüysüz, Harun
Martin, William F.
Preiner, Martina
author_sort Henriques Pereira, Delfina P.
collection PubMed
description Hydrogen gas, H(2), is generated in serpentinizing hydrothermal systems, where it has supplied electrons and energy for microbial communities since there was liquid water on Earth. In modern metabolism, H(2) is converted by hydrogenases into organically bound hydrides (H(–)), for example, the cofactor NADH. It transfers hydrides among molecules, serving as an activated and biologically harnessed form of H(2). In serpentinizing systems, minerals can also bind hydrides and could, in principle, have acted as inorganic hydride donors—possibly as a geochemical protoenzyme, a ‘geozyme’— at the origin of metabolism. To test this idea, we investigated the ability of H(2) to reduce NAD(+) in the presence of iron (Fe), cobalt (Co) and nickel (Ni), metals that occur in serpentinizing systems. In the presence of H(2), all three metals specifically reduce NAD(+) to the biologically relevant form, 1,4‐NADH, with up to 100% conversion rates within a few hours under alkaline aqueous conditions at 40 °C. Using Henry's law, the partial pressure of H(2) in our reactions corresponds to 3.6 mm, a concentration observed in many modern serpentinizing systems. While the reduction of NAD(+) by Ni is strictly H(2)‐dependent, experiments in heavy water ((2)H(2)O) indicate that native Fe can reduce NAD(+) both with and without H(2). The results establish a mechanistic connection between abiotic and biotic hydride donors, indicating that geochemically catalysed, H(2)‐dependent NAD(+) reduction could have preceded the hydrogenase‐dependent reaction in evolution.
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spelling pubmed-93069332022-07-28 Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+) Henriques Pereira, Delfina P. Leethaus, Jana Beyazay, Tugce do Nascimento Vieira, Andrey Kleinermanns, Karl Tüysüz, Harun Martin, William F. Preiner, Martina FEBS J Original Articles Hydrogen gas, H(2), is generated in serpentinizing hydrothermal systems, where it has supplied electrons and energy for microbial communities since there was liquid water on Earth. In modern metabolism, H(2) is converted by hydrogenases into organically bound hydrides (H(–)), for example, the cofactor NADH. It transfers hydrides among molecules, serving as an activated and biologically harnessed form of H(2). In serpentinizing systems, minerals can also bind hydrides and could, in principle, have acted as inorganic hydride donors—possibly as a geochemical protoenzyme, a ‘geozyme’— at the origin of metabolism. To test this idea, we investigated the ability of H(2) to reduce NAD(+) in the presence of iron (Fe), cobalt (Co) and nickel (Ni), metals that occur in serpentinizing systems. In the presence of H(2), all three metals specifically reduce NAD(+) to the biologically relevant form, 1,4‐NADH, with up to 100% conversion rates within a few hours under alkaline aqueous conditions at 40 °C. Using Henry's law, the partial pressure of H(2) in our reactions corresponds to 3.6 mm, a concentration observed in many modern serpentinizing systems. While the reduction of NAD(+) by Ni is strictly H(2)‐dependent, experiments in heavy water ((2)H(2)O) indicate that native Fe can reduce NAD(+) both with and without H(2). The results establish a mechanistic connection between abiotic and biotic hydride donors, indicating that geochemically catalysed, H(2)‐dependent NAD(+) reduction could have preceded the hydrogenase‐dependent reaction in evolution. John Wiley and Sons Inc. 2022-01-03 2022-06 /pmc/articles/PMC9306933/ /pubmed/34923745 http://dx.doi.org/10.1111/febs.16329 Text en © 2022 The Authors. The FEBS Journal published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Henriques Pereira, Delfina P.
Leethaus, Jana
Beyazay, Tugce
do Nascimento Vieira, Andrey
Kleinermanns, Karl
Tüysüz, Harun
Martin, William F.
Preiner, Martina
Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)
title Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)
title_full Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)
title_fullStr Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)
title_full_unstemmed Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)
title_short Role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor NAD(+)
title_sort role of geochemical protoenzymes (geozymes) in primordial metabolism: specific abiotic hydride transfer by metals to the biological redox cofactor nad(+)
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9306933/
https://www.ncbi.nlm.nih.gov/pubmed/34923745
http://dx.doi.org/10.1111/febs.16329
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