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Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips
The resolution of 3D structure reconstructed by laboratory nanoCT is often affected by changes in ambient temperature. Although correction methods based on projection alignment have been widely used, they are time-consuming and complex. Especially in piecewise samples (e.g., chips), the existing met...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9319506/ https://www.ncbi.nlm.nih.gov/pubmed/35885192 http://dx.doi.org/10.3390/e24070967 |
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author | Liu, Mengnan Han, Yu Xi, Xiaoqi Zhu, Linlin Yang, Shuangzhan Tan, Siyu Chen, Jian Li, Lei Yan, Bin |
author_facet | Liu, Mengnan Han, Yu Xi, Xiaoqi Zhu, Linlin Yang, Shuangzhan Tan, Siyu Chen, Jian Li, Lei Yan, Bin |
author_sort | Liu, Mengnan |
collection | PubMed |
description | The resolution of 3D structure reconstructed by laboratory nanoCT is often affected by changes in ambient temperature. Although correction methods based on projection alignment have been widely used, they are time-consuming and complex. Especially in piecewise samples (e.g., chips), the existing methods are semi-automatic because the projections lose attenuation information at some rotation angles. Herein, we propose a fast correction method that directly processes the reconstructed slices. Thus, the limitations of the existing methods are addressed. The method is named multiscale dense U-Net (MD-Unet), which is based on MIMO-Unet and achieves state-of-the-art artifacts correction performance in nanoCT. Experiments show that MD-Unet can significantly boost the correction performance (e.g., with three orders of magnitude improvement in correction speed compared with traditional methods), and MD-Unet+ improves 0.92 dB compared with MIMO-Unet in the chip dataset. |
format | Online Article Text |
id | pubmed-9319506 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93195062022-07-27 Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips Liu, Mengnan Han, Yu Xi, Xiaoqi Zhu, Linlin Yang, Shuangzhan Tan, Siyu Chen, Jian Li, Lei Yan, Bin Entropy (Basel) Article The resolution of 3D structure reconstructed by laboratory nanoCT is often affected by changes in ambient temperature. Although correction methods based on projection alignment have been widely used, they are time-consuming and complex. Especially in piecewise samples (e.g., chips), the existing methods are semi-automatic because the projections lose attenuation information at some rotation angles. Herein, we propose a fast correction method that directly processes the reconstructed slices. Thus, the limitations of the existing methods are addressed. The method is named multiscale dense U-Net (MD-Unet), which is based on MIMO-Unet and achieves state-of-the-art artifacts correction performance in nanoCT. Experiments show that MD-Unet can significantly boost the correction performance (e.g., with three orders of magnitude improvement in correction speed compared with traditional methods), and MD-Unet+ improves 0.92 dB compared with MIMO-Unet in the chip dataset. MDPI 2022-07-13 /pmc/articles/PMC9319506/ /pubmed/35885192 http://dx.doi.org/10.3390/e24070967 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liu, Mengnan Han, Yu Xi, Xiaoqi Zhu, Linlin Yang, Shuangzhan Tan, Siyu Chen, Jian Li, Lei Yan, Bin Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips |
title | Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips |
title_full | Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips |
title_fullStr | Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips |
title_full_unstemmed | Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips |
title_short | Multiscale Dense U-Net: A Fast Correction Method for Thermal Drift Artifacts in Laboratory NanoCT Scans of Semi-Conductor Chips |
title_sort | multiscale dense u-net: a fast correction method for thermal drift artifacts in laboratory nanoct scans of semi-conductor chips |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9319506/ https://www.ncbi.nlm.nih.gov/pubmed/35885192 http://dx.doi.org/10.3390/e24070967 |
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