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LOCOM: A logistic regression model for testing differential abundance in compositional microbiome data with false discovery rate control

Compositional analysis is based on the premise that a relatively small proportion of taxa are differentially abundant, while the ratios of the relative abundances of the remaining taxa remain unchanged. Most existing methods use log-transformed data, but log-transformation of data with pervasive zer...

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Detalles Bibliográficos
Autores principales: Hu, Yingtian, Satten, Glen A., Hu, Yi-Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9335309/
https://www.ncbi.nlm.nih.gov/pubmed/35867822
http://dx.doi.org/10.1073/pnas.2122788119