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Adsorption free energy predicts amyloid protein nucleation rates

Primary nucleation is the fundamental event that initiates the conversion of proteins from their normal physiological forms into pathological amyloid aggregates associated with the onset and development of disorders including systemic amyloidosis, as well as the neurodegenerative conditions Alzheime...

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Autores principales: Toprakcioglu, Zenon, Kamada, Ayaka, Michaels, Thomas C. T., Xie, Mengqi, Krausser, Johannes, Wei, Jiapeng, Saric, Andela, Vendruscolo, Michele, Knowles, Tuomas P. J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9351353/
https://www.ncbi.nlm.nih.gov/pubmed/35901206
http://dx.doi.org/10.1073/pnas.2109718119
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author Toprakcioglu, Zenon
Kamada, Ayaka
Michaels, Thomas C. T.
Xie, Mengqi
Krausser, Johannes
Wei, Jiapeng
Saric, Andela
Vendruscolo, Michele
Knowles, Tuomas P. J.
author_facet Toprakcioglu, Zenon
Kamada, Ayaka
Michaels, Thomas C. T.
Xie, Mengqi
Krausser, Johannes
Wei, Jiapeng
Saric, Andela
Vendruscolo, Michele
Knowles, Tuomas P. J.
author_sort Toprakcioglu, Zenon
collection PubMed
description Primary nucleation is the fundamental event that initiates the conversion of proteins from their normal physiological forms into pathological amyloid aggregates associated with the onset and development of disorders including systemic amyloidosis, as well as the neurodegenerative conditions Alzheimer’s and Parkinson’s diseases. It has become apparent that the presence of surfaces can dramatically modulate nucleation. However, the underlying physicochemical parameters governing this process have been challenging to elucidate, with interfaces in some cases having been found to accelerate aggregation, while in others they can inhibit the kinetics of this process. Here we show through kinetic analysis that for three different fibril-forming proteins, interfaces affect the aggregation reaction mainly through modulating the primary nucleation step. Moreover, we show through direct measurements of the Gibbs free energy of adsorption, combined with theory and coarse-grained computer simulations, that overall nucleation rates are suppressed at high and at low surface interaction strengths but significantly enhanced at intermediate strengths, and we verify these regimes experimentally. Taken together, these results provide a quantitative description of the fundamental process which triggers amyloid formation and shed light on the key factors that control this process.
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spelling pubmed-93513532023-01-28 Adsorption free energy predicts amyloid protein nucleation rates Toprakcioglu, Zenon Kamada, Ayaka Michaels, Thomas C. T. Xie, Mengqi Krausser, Johannes Wei, Jiapeng Saric, Andela Vendruscolo, Michele Knowles, Tuomas P. J. Proc Natl Acad Sci U S A Physical Sciences Primary nucleation is the fundamental event that initiates the conversion of proteins from their normal physiological forms into pathological amyloid aggregates associated with the onset and development of disorders including systemic amyloidosis, as well as the neurodegenerative conditions Alzheimer’s and Parkinson’s diseases. It has become apparent that the presence of surfaces can dramatically modulate nucleation. However, the underlying physicochemical parameters governing this process have been challenging to elucidate, with interfaces in some cases having been found to accelerate aggregation, while in others they can inhibit the kinetics of this process. Here we show through kinetic analysis that for three different fibril-forming proteins, interfaces affect the aggregation reaction mainly through modulating the primary nucleation step. Moreover, we show through direct measurements of the Gibbs free energy of adsorption, combined with theory and coarse-grained computer simulations, that overall nucleation rates are suppressed at high and at low surface interaction strengths but significantly enhanced at intermediate strengths, and we verify these regimes experimentally. Taken together, these results provide a quantitative description of the fundamental process which triggers amyloid formation and shed light on the key factors that control this process. National Academy of Sciences 2022-07-28 2022-08-02 /pmc/articles/PMC9351353/ /pubmed/35901206 http://dx.doi.org/10.1073/pnas.2109718119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Toprakcioglu, Zenon
Kamada, Ayaka
Michaels, Thomas C. T.
Xie, Mengqi
Krausser, Johannes
Wei, Jiapeng
Saric, Andela
Vendruscolo, Michele
Knowles, Tuomas P. J.
Adsorption free energy predicts amyloid protein nucleation rates
title Adsorption free energy predicts amyloid protein nucleation rates
title_full Adsorption free energy predicts amyloid protein nucleation rates
title_fullStr Adsorption free energy predicts amyloid protein nucleation rates
title_full_unstemmed Adsorption free energy predicts amyloid protein nucleation rates
title_short Adsorption free energy predicts amyloid protein nucleation rates
title_sort adsorption free energy predicts amyloid protein nucleation rates
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9351353/
https://www.ncbi.nlm.nih.gov/pubmed/35901206
http://dx.doi.org/10.1073/pnas.2109718119
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