Protocol to estimate cell type proportions from bulk RNA-seq using DAISM-DNN(XMBD)

Computational protocols for cell type deconvolution from bulk RNA-seq data have been used to understand cellular heterogeneity in disease-related samples, but their performance can be impacted by batch effect among datasets. Here, we present a DAISM-DNN protocol to achieve robust cell type proportio...

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Detalles Bibliográficos
Autores principales: Lin, Yating, Wu, Shangze, Xiao, Xu, Zhao, Jingbo, Wang, Minshu, Li, Haojun, Wang, Kejia, Zhang, Minwei, Zheng, Frank, Yang, Wenxian, Zhang, Lei, Han, Jiahuai, Yu, Rongshan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Protocol
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356155/
https://www.ncbi.nlm.nih.gov/pubmed/35942344
http://dx.doi.org/10.1016/j.xpro.2022.101587

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356155/
https://www.ncbi.nlm.nih.gov/pubmed/35942344
http://dx.doi.org/10.1016/j.xpro.2022.101587

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