Cargando…

Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory

The kinetics of Bergman cyclization (BC) of enediynes into 1,4-benzene diradicals (also known as p-benzynes) have attracted interest ever since the discovery of natural enediynes which pointed out a surprising reactivity profile difference across enediynes with varying structural architectures. From...

Descripción completa

Detalles Bibliográficos
Autores principales: Bhattacharya, Prabuddha, Chakraborty, Soham, Balaji, Ashwin, Basak, Amit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386575/
https://www.ncbi.nlm.nih.gov/pubmed/36090394
http://dx.doi.org/10.1039/d2ra03193k
_version_ 1784769843821543424
author Bhattacharya, Prabuddha
Chakraborty, Soham
Balaji, Ashwin
Basak, Amit
author_facet Bhattacharya, Prabuddha
Chakraborty, Soham
Balaji, Ashwin
Basak, Amit
author_sort Bhattacharya, Prabuddha
collection PubMed
description The kinetics of Bergman cyclization (BC) of enediynes into 1,4-benzene diradicals (also known as p-benzynes) have attracted interest ever since the discovery of natural enediynes which pointed out a surprising reactivity profile difference across enediynes with varying structural architectures. From the analysis of experimental kinetic data, several models were proposed to have a structure-kinetics correlation, out of which, the cd-distance model and the transition state model are the most accepted ones. Recently, Houk et al. introduced a distortion model to explain the regioselectivity of nucleophilic addition to unsymmetrical o-benzynes based on the geometry of the transition state. In the case of BC, since the reaction is endothermic, the transition state geometrically resembles the product structure which implies that in the reaction pathway, the sp-carbons of enediynes are transformed into the trigonal sp(2) carbons of the benzenoid product. Thus, greater bending of the interior angles at the proximal alkyne carbons in the enediynes will lead to a lower activation barrier for the BC and hence faster cyclization. This hypothesis has been tested on a series of enediynes including natural product surrogates and the extent of deviation correlates well with the kinetic results. A cut-off value for the average internal proximal angles has been proposed to categorize enediynes as per their reactivity under ambient conditions. We believe that this distortion theory offers an alternative model in designing new unnatural enediynes with desired kinetic stabilities.
format Online
Article
Text
id pubmed-9386575
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-93865752022-09-08 Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory Bhattacharya, Prabuddha Chakraborty, Soham Balaji, Ashwin Basak, Amit RSC Adv Chemistry The kinetics of Bergman cyclization (BC) of enediynes into 1,4-benzene diradicals (also known as p-benzynes) have attracted interest ever since the discovery of natural enediynes which pointed out a surprising reactivity profile difference across enediynes with varying structural architectures. From the analysis of experimental kinetic data, several models were proposed to have a structure-kinetics correlation, out of which, the cd-distance model and the transition state model are the most accepted ones. Recently, Houk et al. introduced a distortion model to explain the regioselectivity of nucleophilic addition to unsymmetrical o-benzynes based on the geometry of the transition state. In the case of BC, since the reaction is endothermic, the transition state geometrically resembles the product structure which implies that in the reaction pathway, the sp-carbons of enediynes are transformed into the trigonal sp(2) carbons of the benzenoid product. Thus, greater bending of the interior angles at the proximal alkyne carbons in the enediynes will lead to a lower activation barrier for the BC and hence faster cyclization. This hypothesis has been tested on a series of enediynes including natural product surrogates and the extent of deviation correlates well with the kinetic results. A cut-off value for the average internal proximal angles has been proposed to categorize enediynes as per their reactivity under ambient conditions. We believe that this distortion theory offers an alternative model in designing new unnatural enediynes with desired kinetic stabilities. The Royal Society of Chemistry 2022-08-18 /pmc/articles/PMC9386575/ /pubmed/36090394 http://dx.doi.org/10.1039/d2ra03193k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Bhattacharya, Prabuddha
Chakraborty, Soham
Balaji, Ashwin
Basak, Amit
Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory
title Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory
title_full Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory
title_fullStr Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory
title_full_unstemmed Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory
title_short Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory
title_sort angle distortion model for predicting enediyne activation towards bergman cyclization: an alternate to the distance theory
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386575/
https://www.ncbi.nlm.nih.gov/pubmed/36090394
http://dx.doi.org/10.1039/d2ra03193k
work_keys_str_mv AT bhattacharyaprabuddha angledistortionmodelforpredictingenediyneactivationtowardsbergmancyclizationanalternatetothedistancetheory
AT chakrabortysoham angledistortionmodelforpredictingenediyneactivationtowardsbergmancyclizationanalternatetothedistancetheory
AT balajiashwin angledistortionmodelforpredictingenediyneactivationtowardsbergmancyclizationanalternatetothedistancetheory
AT basakamit angledistortionmodelforpredictingenediyneactivationtowardsbergmancyclizationanalternatetothedistancetheory