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Nomograms of human hippocampal volume shifted by polygenic scores
Nomograms are important clinical tools applied widely in both developing and aging populations. They are generally constructed as normative models identifying cases as outliers to a distribution of healthy controls. Currently used normative models do not account for genetic heterogeneity. Hippocampa...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9391046/ https://www.ncbi.nlm.nih.gov/pubmed/35938915 http://dx.doi.org/10.7554/eLife.78232 |
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author | Janahi, Mohammed Aksman, Leon Schott, Jonathan M Mokrab, Younes Altmann, Andre |
author_facet | Janahi, Mohammed Aksman, Leon Schott, Jonathan M Mokrab, Younes Altmann, Andre |
author_sort | Janahi, Mohammed |
collection | PubMed |
description | Nomograms are important clinical tools applied widely in both developing and aging populations. They are generally constructed as normative models identifying cases as outliers to a distribution of healthy controls. Currently used normative models do not account for genetic heterogeneity. Hippocampal volume (HV) is a key endophenotype for many brain disorders. Here, we examine the impact of genetic adjustment on HV nomograms and the translational ability to detect dementia patients. Using imaging data from 35,686 healthy subjects aged 44–82 from the UK Biobank (UKB), we built HV nomograms using Gaussian process regression (GPR), which – compared to a previous method – extended the application age by 20 years, including dementia critical age ranges. Using HV polygenic scores (HV-PGS), we built genetically adjusted nomograms from participants stratified into the top and bottom 30% of HV-PGS. This shifted the nomograms in the expected directions by ~100 mm(3) (2.3% of the average HV), which equates to 3 years of normal aging for a person aged ~65. Clinical impact of genetically adjusted nomograms was investigated by comparing 818 subjects from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database diagnosed as either cognitively normal (CN), having mild cognitive impairment (MCI) or Alzheimer’s disease (AD) patients. While no significant change in the survival analysis was found for MCI-to-AD conversion, an average of 68% relative decrease was found in intra-diagnostic-group variance, highlighting the importance of genetic adjustment in untangling phenotypic heterogeneity. |
format | Online Article Text |
id | pubmed-9391046 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-93910462022-08-20 Nomograms of human hippocampal volume shifted by polygenic scores Janahi, Mohammed Aksman, Leon Schott, Jonathan M Mokrab, Younes Altmann, Andre eLife Genetics and Genomics Nomograms are important clinical tools applied widely in both developing and aging populations. They are generally constructed as normative models identifying cases as outliers to a distribution of healthy controls. Currently used normative models do not account for genetic heterogeneity. Hippocampal volume (HV) is a key endophenotype for many brain disorders. Here, we examine the impact of genetic adjustment on HV nomograms and the translational ability to detect dementia patients. Using imaging data from 35,686 healthy subjects aged 44–82 from the UK Biobank (UKB), we built HV nomograms using Gaussian process regression (GPR), which – compared to a previous method – extended the application age by 20 years, including dementia critical age ranges. Using HV polygenic scores (HV-PGS), we built genetically adjusted nomograms from participants stratified into the top and bottom 30% of HV-PGS. This shifted the nomograms in the expected directions by ~100 mm(3) (2.3% of the average HV), which equates to 3 years of normal aging for a person aged ~65. Clinical impact of genetically adjusted nomograms was investigated by comparing 818 subjects from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database diagnosed as either cognitively normal (CN), having mild cognitive impairment (MCI) or Alzheimer’s disease (AD) patients. While no significant change in the survival analysis was found for MCI-to-AD conversion, an average of 68% relative decrease was found in intra-diagnostic-group variance, highlighting the importance of genetic adjustment in untangling phenotypic heterogeneity. eLife Sciences Publications, Ltd 2022-08-08 /pmc/articles/PMC9391046/ /pubmed/35938915 http://dx.doi.org/10.7554/eLife.78232 Text en © 2022, Janahi et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Genetics and Genomics Janahi, Mohammed Aksman, Leon Schott, Jonathan M Mokrab, Younes Altmann, Andre Nomograms of human hippocampal volume shifted by polygenic scores |
title | Nomograms of human hippocampal volume shifted by polygenic scores |
title_full | Nomograms of human hippocampal volume shifted by polygenic scores |
title_fullStr | Nomograms of human hippocampal volume shifted by polygenic scores |
title_full_unstemmed | Nomograms of human hippocampal volume shifted by polygenic scores |
title_short | Nomograms of human hippocampal volume shifted by polygenic scores |
title_sort | nomograms of human hippocampal volume shifted by polygenic scores |
topic | Genetics and Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9391046/ https://www.ncbi.nlm.nih.gov/pubmed/35938915 http://dx.doi.org/10.7554/eLife.78232 |
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