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Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists

The β(3)‐adrenergic receptor (β(3)‐AR) is found in several tissues such as adipose tissue and urinary bladder. It is a therapeutic target because it plays a role in thermogenesis, lipolysis, and bladder relaxation. Two β(3)‐AR agonists are used clinically: mirabegron 1 and vibegron 2, which are indi...

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Autores principales: Ujiantari, Navista Sri Octa, Ham, Seungmin, Nagiri, Chisae, Shihoya, Wataru, Nureki, Osamu, Hutchinson, Dana Sabine, Schuster, Daniela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9400856/
https://www.ncbi.nlm.nih.gov/pubmed/34963040
http://dx.doi.org/10.1002/minf.202100223
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author Ujiantari, Navista Sri Octa
Ham, Seungmin
Nagiri, Chisae
Shihoya, Wataru
Nureki, Osamu
Hutchinson, Dana Sabine
Schuster, Daniela
author_facet Ujiantari, Navista Sri Octa
Ham, Seungmin
Nagiri, Chisae
Shihoya, Wataru
Nureki, Osamu
Hutchinson, Dana Sabine
Schuster, Daniela
author_sort Ujiantari, Navista Sri Octa
collection PubMed
description The β(3)‐adrenergic receptor (β(3)‐AR) is found in several tissues such as adipose tissue and urinary bladder. It is a therapeutic target because it plays a role in thermogenesis, lipolysis, and bladder relaxation. Two β(3)‐AR agonists are used clinically: mirabegron 1 and vibegron 2, which are indicated for overactive bladder syndrome. However, these drugs show adverse effects, including increased blood pressure in mirabegron patients. Hence, new β(3)‐AR agonists are needed as starting points for drug development. Previous pharmacophore modeling studies of the β(3)‐AR did not involve experimental in vitro validation. Therefore, this study aimed to conduct prospective virtual screening and confirm the biological activity of virtual hits. Ligand‐based pharmacophore modeling was performed since no 3D structure of human β(3)‐AR is yet available. A dataset consisting of β(3)‐AR agonists was prepared to build and validate the pharmacophore models. The best model was employed for prospective virtual screening, followed by physicochemical property filtering and a docking evaluation. To confirm the activity of the virtual hits, an in vitro assay was conducted, measuring cAMP levels at the cloned β(3)‐AR. Out of 35 tested compounds, 4 compounds were active in CHO−K1 cells expressing the human β(3)‐AR, and 8 compounds were active in CHO−K1 cells expressing the mouse β(3)‐AR.
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spelling pubmed-94008562022-08-26 Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists Ujiantari, Navista Sri Octa Ham, Seungmin Nagiri, Chisae Shihoya, Wataru Nureki, Osamu Hutchinson, Dana Sabine Schuster, Daniela Mol Inform Research Articles The β(3)‐adrenergic receptor (β(3)‐AR) is found in several tissues such as adipose tissue and urinary bladder. It is a therapeutic target because it plays a role in thermogenesis, lipolysis, and bladder relaxation. Two β(3)‐AR agonists are used clinically: mirabegron 1 and vibegron 2, which are indicated for overactive bladder syndrome. However, these drugs show adverse effects, including increased blood pressure in mirabegron patients. Hence, new β(3)‐AR agonists are needed as starting points for drug development. Previous pharmacophore modeling studies of the β(3)‐AR did not involve experimental in vitro validation. Therefore, this study aimed to conduct prospective virtual screening and confirm the biological activity of virtual hits. Ligand‐based pharmacophore modeling was performed since no 3D structure of human β(3)‐AR is yet available. A dataset consisting of β(3)‐AR agonists was prepared to build and validate the pharmacophore models. The best model was employed for prospective virtual screening, followed by physicochemical property filtering and a docking evaluation. To confirm the activity of the virtual hits, an in vitro assay was conducted, measuring cAMP levels at the cloned β(3)‐AR. Out of 35 tested compounds, 4 compounds were active in CHO−K1 cells expressing the human β(3)‐AR, and 8 compounds were active in CHO−K1 cells expressing the mouse β(3)‐AR. John Wiley and Sons Inc. 2022-02-02 2022-07 /pmc/articles/PMC9400856/ /pubmed/34963040 http://dx.doi.org/10.1002/minf.202100223 Text en © 2022 The Authors. Molecular Informatics published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Ujiantari, Navista Sri Octa
Ham, Seungmin
Nagiri, Chisae
Shihoya, Wataru
Nureki, Osamu
Hutchinson, Dana Sabine
Schuster, Daniela
Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists
title Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists
title_full Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists
title_fullStr Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists
title_full_unstemmed Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists
title_short Pharmacophore‐guided Virtual Screening to Identify New β(3)‐adrenergic Receptor Agonists
title_sort pharmacophore‐guided virtual screening to identify new β(3)‐adrenergic receptor agonists
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9400856/
https://www.ncbi.nlm.nih.gov/pubmed/34963040
http://dx.doi.org/10.1002/minf.202100223
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