A Pipeline NanoTRF as a New Tool for De Novo Satellite DNA Identification in the Raw Nanopore Sequencing Reads of Plant Genomes

High-copy tandemly organized repeats (TRs), or satellite DNA, is an important but still enigmatic component of eukaryotic genomes. TRs comprise arrays of multi-copy and highly similar tandem repeats, which makes the elucidation of TRs a very challenging task. Oxford Nanopore sequencing data provide...

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Detalles Bibliográficos
Autores principales: Kirov, Ilya, Kolganova, Elizaveta, Dudnikov, Maxim, Yurkevich, Olga Yu., Amosova, Alexandra V., Muravenko, Olga V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413040/
https://www.ncbi.nlm.nih.gov/pubmed/36015406
http://dx.doi.org/10.3390/plants11162103

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413040/
https://www.ncbi.nlm.nih.gov/pubmed/36015406
http://dx.doi.org/10.3390/plants11162103

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